Cluster: HRGMv2_4304_CGC52
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_3 | 4025 | 8068 | - | GH141 |
| TF | HRGMv2_4304_34 | HRGMv2_4304_34_4 | 8137 | 9705 | - | HTH_AraC |
| TC | HRGMv2_4304_34 | HRGMv2_4304_34_5 | 9698 | 11488 | - | 8.A.59.2.1 |
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_6 | 11514 | 13631 | - | GH36 |
| TC | HRGMv2_4304_34 | HRGMv2_4304_34_7 | 13628 | 14467 | - | 3.A.1.1.30 |
| TC | HRGMv2_4304_34 | HRGMv2_4304_34_8 | 14471 | 15328 | - | 3.A.1.1.42 |
| STP | HRGMv2_4304_34 | HRGMv2_4304_34_9 | 15416 | 16783 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_10 | 17010 | 18884 | - | GH43_22 |
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_11 | 19094 | 21247 | - | GH43_22 |
| pfam | HRGMv2_4304_34 | HRGMv2_4304_34_12 | 21283 | 22371 | - | FIVAR | LRR_5 |
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_13 | 22431 | 25799 | - | GH97 |
| CAZyme | HRGMv2_4304_34 | HRGMv2_4304_34_14 | 26035 | 33774 | - | GH141 |
| pfam | HRGMv2_4304_34 | HRGMv2_4304_34_15 | 33844 | 35082 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | HRGMv2_4304_34 | HRGMv2_4304_34_16 | 35102 | 35926 | - | 3.A.1.1.45 |
| TC | HRGMv2_4304_34 | HRGMv2_4304_34_17 | 35928 | 36794 | - | 3.A.1.1.42 |
Gene ID: HRGMv2_4304_34_3
Type: CAZyme
Location: 4025 - 8068 (-)
Type: CAZyme
Location: 4025 - 8068 (-)
Gene ID: HRGMv2_4304_34_4
Type: TF
Location: 8137 - 9705 (-)
Type: TF
Location: 8137 - 9705 (-)
Gene ID: HRGMv2_4304_34_5
Type: TC
Location: 9698 - 11488 (-)
Type: TC
Location: 9698 - 11488 (-)
Gene ID: HRGMv2_4304_34_6
Type: CAZyme
Location: 11514 - 13631 (-)
Type: CAZyme
Location: 11514 - 13631 (-)
Gene ID: HRGMv2_4304_34_7
Type: TC
Location: 13628 - 14467 (-)
Type: TC
Location: 13628 - 14467 (-)
Gene ID: HRGMv2_4304_34_8
Type: TC
Location: 14471 - 15328 (-)
Type: TC
Location: 14471 - 15328 (-)
Gene ID: HRGMv2_4304_34_9
Type: STP
Location: 15416 - 16783 (-)
Type: STP
Location: 15416 - 16783 (-)
Gene ID: HRGMv2_4304_34_10
Type: CAZyme
Location: 17010 - 18884 (-)
Type: CAZyme
Location: 17010 - 18884 (-)
Gene ID: HRGMv2_4304_34_11
Type: CAZyme
Location: 19094 - 21247 (-)
Type: CAZyme
Location: 19094 - 21247 (-)
Gene ID: HRGMv2_4304_34_12
Type: pfam
Location: 21283 - 22371 (-)
Type: pfam
Location: 21283 - 22371 (-)
Gene ID: HRGMv2_4304_34_13
Type: CAZyme
Location: 22431 - 25799 (-)
Type: CAZyme
Location: 22431 - 25799 (-)
Gene ID: HRGMv2_4304_34_14
Type: CAZyme
Location: 26035 - 33774 (-)
Type: CAZyme
Location: 26035 - 33774 (-)
Gene ID: HRGMv2_4304_34_15
Type: pfam
Location: 33844 - 35082 (-)
Type: pfam
Location: 33844 - 35082 (-)
Gene ID: HRGMv2_4304_34_16
Type: TC
Location: 35102 - 35926 (-)
Type: TC
Location: 35102 - 35926 (-)
Gene ID: HRGMv2_4304_34_17
Type: TC
Location: 35928 - 36794 (-)
Type: TC
Location: 35928 - 36794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.