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Cluster: HRGMv2_4304_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4304_31 HRGMv2_4304_31_40 36569 37474 + 3.A.1.1.7
TC HRGMv2_4304_31 HRGMv2_4304_31_41 37479 38339 + 3.A.1.1.25
STP HRGMv2_4304_31 HRGMv2_4304_31_42 38447 39802 + SBP_bac_1
STP HRGMv2_4304_31 HRGMv2_4304_31_43 39821 41341 + Pyr_redox_2
CAZyme HRGMv2_4304_31 HRGMv2_4304_31_44 41455 42852 - GH32
STP HRGMv2_4304_31 HRGMv2_4304_31_45 43105 44499 + SBP_bac_1
TC HRGMv2_4304_31 HRGMv2_4304_31_46 44615 45505 + 3.A.1.1.18
TC HRGMv2_4304_31 HRGMv2_4304_31_47 45511 46368 + 3.A.1.1.18
Gene ID: HRGMv2_4304_31_40
Type: TC
Location: 36569 - 37474 (+)
Gene ID: HRGMv2_4304_31_41
Type: TC
Location: 37479 - 38339 (+)
Gene ID: HRGMv2_4304_31_42
Type: STP
Location: 38447 - 39802 (+)
Gene ID: HRGMv2_4304_31_43
Type: STP
Location: 39821 - 41341 (+)
Gene ID: HRGMv2_4304_31_44
Type: CAZyme
Location: 41455 - 42852 (-)
Gene ID: HRGMv2_4304_31_45
Type: STP
Location: 43105 - 44499 (+)
Gene ID: HRGMv2_4304_31_46
Type: TC
Location: 44615 - 45505 (+)
Gene ID: HRGMv2_4304_31_47
Type: TC
Location: 45511 - 46368 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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