Cluster: HRGMv2_4304_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_2 | HRGMv2_4304_2_31 | 30125 | 34333 | - | CBM51 | CBM51 |
| pfam | HRGMv2_4304_2 | HRGMv2_4304_2_32 | 34714 | 36813 | - | FIVAR | FIVAR | LRR_5 |
| CAZyme | HRGMv2_4304_2 | HRGMv2_4304_2_33 | 36881 | 39763 | - | GH59 |
| STP | HRGMv2_4304_2 | HRGMv2_4304_2_34 | 39941 | 40120 | - | HMA |
| pfam | HRGMv2_4304_2 | HRGMv2_4304_2_35 | 40133 | 40429 | - | Trns_repr_metal |
| TC | HRGMv2_4304_2 | HRGMv2_4304_2_36 | 40472 | 42673 | - | 3.A.3.5.15 |
Gene ID: HRGMv2_4304_2_31
Type: CAZyme
Location: 30125 - 34333 (-)
Type: CAZyme
Location: 30125 - 34333 (-)
Gene ID: HRGMv2_4304_2_32
Type: pfam
Location: 34714 - 36813 (-)
Type: pfam
Location: 34714 - 36813 (-)
Gene ID: HRGMv2_4304_2_33
Type: CAZyme
Location: 36881 - 39763 (-)
Type: CAZyme
Location: 36881 - 39763 (-)
Gene ID: HRGMv2_4304_2_34
Type: STP
Location: 39941 - 40120 (-)
Type: STP
Location: 39941 - 40120 (-)
Gene ID: HRGMv2_4304_2_35
Type: pfam
Location: 40133 - 40429 (-)
Type: pfam
Location: 40133 - 40429 (-)
Gene ID: HRGMv2_4304_2_36
Type: TC
Location: 40472 - 42673 (-)
Type: TC
Location: 40472 - 42673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.