Cluster: HRGMv2_4304_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_29 | HRGMv2_4304_29_5 | 3688 | 4575 | + | 3.A.1.105.9 |
| pfam | HRGMv2_4304_29 | HRGMv2_4304_29_6 | 4565 | 5335 | + | ABC2_membrane |
| pfam | HRGMv2_4304_29 | HRGMv2_4304_29_7 | 5453 | 6337 | + | Lactamase_B |
| CAZyme | HRGMv2_4304_29 | HRGMv2_4304_29_8 | 6391 | 7752 | + | GH1 |
Gene ID: HRGMv2_4304_29_5
Type: TC
Location: 3688 - 4575 (+)
Type: TC
Location: 3688 - 4575 (+)
Gene ID: HRGMv2_4304_29_6
Type: pfam
Location: 4565 - 5335 (+)
Type: pfam
Location: 4565 - 5335 (+)
Gene ID: HRGMv2_4304_29_7
Type: pfam
Location: 5453 - 6337 (+)
Type: pfam
Location: 5453 - 6337 (+)
Gene ID: HRGMv2_4304_29_8
Type: CAZyme
Location: 6391 - 7752 (+)
Type: CAZyme
Location: 6391 - 7752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.