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Cluster: HRGMv2_4304_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_23 HRGMv2_4304_23_7 4606 10149 - GH39
CAZyme HRGMv2_4304_23 HRGMv2_4304_23_8 10319 16525 - CBM35 | GH39
CAZyme HRGMv2_4304_23 HRGMv2_4304_23_9 16551 18551 - GH31_4
TC HRGMv2_4304_23 HRGMv2_4304_23_10 18561 19409 - 3.A.1.1.44
TC HRGMv2_4304_23 HRGMv2_4304_23_11 19409 20311 - 3.A.1.1.41
TC HRGMv2_4304_23 HRGMv2_4304_23_12 20384 21676 - 3.A.1.1.44
TF HRGMv2_4304_23 HRGMv2_4304_23_13 21784 23319 - HTH_AraC | HTH_AraC
TC HRGMv2_4304_23 HRGMv2_4304_23_14 23300 25117 - 8.A.59.2.1
CAZyme HRGMv2_4304_23 HRGMv2_4304_23_15 25267 26214 - AA1
Gene ID: HRGMv2_4304_23_7
Type: CAZyme
Location: 4606 - 10149 (-)
Gene ID: HRGMv2_4304_23_8
Type: CAZyme
Location: 10319 - 16525 (-)
Gene ID: HRGMv2_4304_23_9
Type: CAZyme
Location: 16551 - 18551 (-)
Gene ID: HRGMv2_4304_23_10
Type: TC
Location: 18561 - 19409 (-)
Gene ID: HRGMv2_4304_23_11
Type: TC
Location: 19409 - 20311 (-)
Gene ID: HRGMv2_4304_23_12
Type: TC
Location: 20384 - 21676 (-)
Gene ID: HRGMv2_4304_23_13
Type: TF
Location: 21784 - 23319 (-)
Gene ID: HRGMv2_4304_23_14
Type: TC
Location: 23300 - 25117 (-)
Gene ID: HRGMv2_4304_23_15
Type: CAZyme
Location: 25267 - 26214 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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