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Cluster: HRGMv2_4304_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_19 HRGMv2_4304_19_8 7522 9216 + CBM67 | CBM67
CAZyme HRGMv2_4304_19 HRGMv2_4304_19_9 9164 13972 + CBM32 | GH78
CAZyme HRGMv2_4304_19 HRGMv2_4304_19_10 14031 20876 + CBM67 | GH78
CAZyme HRGMv2_4304_19 HRGMv2_4304_19_11 20897 27406 + CBM67 | GH78
TC HRGMv2_4304_19 HRGMv2_4304_19_12 27745 28947 + 2.A.36.2.1
STP HRGMv2_4304_19 HRGMv2_4304_19_13 29188 29835 + TetR_N
TC HRGMv2_4304_19 HRGMv2_4304_19_14 30074 31270 + 3.A.1.4.3
TC HRGMv2_4304_19 HRGMv2_4304_19_15 31306 32172 + 3.A.1.4.10
TC HRGMv2_4304_19 HRGMv2_4304_19_16 32186 33181 + 3.A.1.4.3
TC HRGMv2_4304_19 HRGMv2_4304_19_17 33178 33942 + 3.A.1.4.10
TC HRGMv2_4304_19 HRGMv2_4304_19_18 33944 34654 + 3.A.1.4.10
Gene ID: HRGMv2_4304_19_8
Type: CAZyme
Location: 7522 - 9216 (+)
Gene ID: HRGMv2_4304_19_9
Type: CAZyme
Location: 9164 - 13972 (+)
Gene ID: HRGMv2_4304_19_10
Type: CAZyme
Location: 14031 - 20876 (+)
Gene ID: HRGMv2_4304_19_11
Type: CAZyme
Location: 20897 - 27406 (+)
Gene ID: HRGMv2_4304_19_12
Type: TC
Location: 27745 - 28947 (+)
Gene ID: HRGMv2_4304_19_13
Type: STP
Location: 29188 - 29835 (+)
Gene ID: HRGMv2_4304_19_14
Type: TC
Location: 30074 - 31270 (+)
Gene ID: HRGMv2_4304_19_15
Type: TC
Location: 31306 - 32172 (+)
Gene ID: HRGMv2_4304_19_16
Type: TC
Location: 32186 - 33181 (+)
Gene ID: HRGMv2_4304_19_17
Type: TC
Location: 33178 - 33942 (+)
Gene ID: HRGMv2_4304_19_18
Type: TC
Location: 33944 - 34654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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