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Cluster: HRGMv2_4304_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_17 HRGMv2_4304_17_10 10988 16240 - CBM6 | GH3
pfam HRGMv2_4304_17 HRGMv2_4304_17_11 16559 17344 - His_biosynth
NULL(UNKNOWN) HRGMv2_4304_17 HRGMv2_4304_17_12 17590 17988 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4304_17 HRGMv2_4304_17_13 18065 19480 - 9.A.11.1.1
pfam HRGMv2_4304_17 HRGMv2_4304_17_14 19668 20549 + PAP2
pfam HRGMv2_4304_17 HRGMv2_4304_17_15 20546 21643 - Exo_endo_phos
TC HRGMv2_4304_17 HRGMv2_4304_17_16 21640 22986 - 2.A.66.1.32
pfam HRGMv2_4304_17 HRGMv2_4304_17_17 22999 23868 - DegV
NULL(UNKNOWN) HRGMv2_4304_17 HRGMv2_4304_17_18 24081 24554 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4304_17 HRGMv2_4304_17_19 24630 25556 - GH25
Gene ID: HRGMv2_4304_17_10
Type: CAZyme
Location: 10988 - 16240 (-)
Gene ID: HRGMv2_4304_17_11
Type: pfam
Location: 16559 - 17344 (-)
Gene ID: HRGMv2_4304_17_12
Type:
Location: 17590 - 17988 (-)
Gene ID: HRGMv2_4304_17_13
Type: TC
Location: 18065 - 19480 (-)
Gene ID: HRGMv2_4304_17_14
Type: pfam
Location: 19668 - 20549 (+)
Gene ID: HRGMv2_4304_17_15
Type: pfam
Location: 20546 - 21643 (-)
Gene ID: HRGMv2_4304_17_16
Type: TC
Location: 21640 - 22986 (-)
Gene ID: HRGMv2_4304_17_17
Type: pfam
Location: 22999 - 23868 (-)
Gene ID: HRGMv2_4304_17_18
Type:
Location: 24081 - 24554 (+)
Gene ID: HRGMv2_4304_17_19
Type: CAZyme
Location: 24630 - 25556 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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