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Cluster: HRGMv2_4304_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4304_16 HRGMv2_4304_16_61 76850 77887 - 3.A.1.2.16
TC HRGMv2_4304_16 HRGMv2_4304_16_62 77854 79347 - 3.A.1.2.20
STP HRGMv2_4304_16 HRGMv2_4304_16_63 79499 80473 - Peripla_BP_1
TC HRGMv2_4304_16 HRGMv2_4304_16_64 80460 82217 - 8.A.59.2.1
TF HRGMv2_4304_16 HRGMv2_4304_16_65 82234 83826 - HTH_AraC | HTH_AraC
sulfatase HRGMv2_4304_16 HRGMv2_4304_16_66 83938 86721 - S1_19
CAZyme HRGMv2_4304_16 HRGMv2_4304_16_67 86776 91653 - CBM91 | GH159 | GH43_10
CAZyme HRGMv2_4304_16 HRGMv2_4304_16_68 91750 94494 - GH146
Gene ID: HRGMv2_4304_16_61
Type: TC
Location: 76850 - 77887 (-)
Gene ID: HRGMv2_4304_16_62
Type: TC
Location: 77854 - 79347 (-)
Gene ID: HRGMv2_4304_16_63
Type: STP
Location: 79499 - 80473 (-)
Gene ID: HRGMv2_4304_16_64
Type: TC
Location: 80460 - 82217 (-)
Gene ID: HRGMv2_4304_16_65
Type: TF
Location: 82234 - 83826 (-)
Gene ID: HRGMv2_4304_16_66
Type: sulfatase
Location: 83938 - 86721 (-)
Gene ID: HRGMv2_4304_16_67
Type: CAZyme
Location: 86776 - 91653 (-)
Gene ID: HRGMv2_4304_16_68
Type: CAZyme
Location: 91750 - 94494 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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