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Cluster: HRGMv2_4304_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_15 HRGMv2_4304_15_2 1987 5844 - CBM67 | GH78
pfam HRGMv2_4304_15 HRGMv2_4304_15_3 5975 7072 - Lactamase_B_2
pfam HRGMv2_4304_15 HRGMv2_4304_15_4 7077 8072 - URO-D
TC HRGMv2_4304_15 HRGMv2_4304_15_5 8117 9106 - 3.A.1.2.15
TC HRGMv2_4304_15 HRGMv2_4304_15_6 9072 10616 - 3.A.1.2.20
STP HRGMv2_4304_15 HRGMv2_4304_15_7 10723 11835 - Peripla_BP_1
TF HRGMv2_4304_15 HRGMv2_4304_15_8 12128 12787 + GntR
CAZyme HRGMv2_4304_15 HRGMv2_4304_15_9 12868 16452 - GH106
STP HRGMv2_4304_15 HRGMv2_4304_15_10 16597 17883 - SBP_bac_1
TC HRGMv2_4304_15 HRGMv2_4304_15_11 17989 19728 + 8.A.59.2.1
TF HRGMv2_4304_15 HRGMv2_4304_15_12 19782 21350 + HTH_AraC | HTH_AraC
TC HRGMv2_4304_15 HRGMv2_4304_15_13 21347 21871 - 9.B.156.3.1
Gene ID: HRGMv2_4304_15_2
Type: CAZyme
Location: 1987 - 5844 (-)
Gene ID: HRGMv2_4304_15_3
Type: pfam
Location: 5975 - 7072 (-)
Gene ID: HRGMv2_4304_15_4
Type: pfam
Location: 7077 - 8072 (-)
Gene ID: HRGMv2_4304_15_5
Type: TC
Location: 8117 - 9106 (-)
Gene ID: HRGMv2_4304_15_6
Type: TC
Location: 9072 - 10616 (-)
Gene ID: HRGMv2_4304_15_7
Type: STP
Location: 10723 - 11835 (-)
Gene ID: HRGMv2_4304_15_8
Type: TF
Location: 12128 - 12787 (+)
Gene ID: HRGMv2_4304_15_9
Type: CAZyme
Location: 12868 - 16452 (-)
Gene ID: HRGMv2_4304_15_10
Type: STP
Location: 16597 - 17883 (-)
Gene ID: HRGMv2_4304_15_11
Type: TC
Location: 17989 - 19728 (+)
Gene ID: HRGMv2_4304_15_12
Type: TF
Location: 19782 - 21350 (+)
Gene ID: HRGMv2_4304_15_13
Type: TC
Location: 21347 - 21871 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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