Cluster: HRGMv2_4304_CGC33
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_14 | HRGMv2_4304_14_35 | 44062 | 49596 | + | CBM22 | GH146 |
| CAZyme | HRGMv2_4304_14 | HRGMv2_4304_14_36 | 49622 | 54877 | + | CBM22 | CBM6 | CBM91 | GH43_10 | GH43_16 |
| CAZyme | HRGMv2_4304_14 | HRGMv2_4304_14_37 | 55326 | 58814 | + | CBM22 | CBM22 | GH10 |
| pfam | HRGMv2_4304_14 | HRGMv2_4304_14_38 | 58816 | 60225 | + | LRR_5 |
| CAZyme | HRGMv2_4304_14 | HRGMv2_4304_14_39 | 60763 | 70584 | + | GH146 | GH43_35 |
| NULL(UNKNOWN) | HRGMv2_4304_14 | HRGMv2_4304_14_40 | 70733 | 71710 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_41 | 72231 | 72893 | + | 3.A.2.1.5 |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_42 | 72985 | 73209 | + | 3.A.2.1.5 |
| pfam | HRGMv2_4304_14 | HRGMv2_4304_14_43 | 73229 | 73729 | + | ATP-synt_B |
| pfam | HRGMv2_4304_14 | HRGMv2_4304_14_44 | 73710 | 74213 | + | OSCP |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_45 | 74219 | 75913 | + | 3.A.2.1.5 |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_46 | 75873 | 76625 | + | 3.A.2.1.5 |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_47 | 76634 | 78040 | + | 3.A.2.1.5 |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_48 | 78060 | 78476 | + | 3.A.2.1.5 |
| TC | HRGMv2_4304_14 | HRGMv2_4304_14_49 | 78785 | 80425 | + | 9.B.34.1.1 |
Gene ID: HRGMv2_4304_14_35
Type: CAZyme
Location: 44062 - 49596 (+)
Type: CAZyme
Location: 44062 - 49596 (+)
Gene ID: HRGMv2_4304_14_36
Type: CAZyme
Location: 49622 - 54877 (+)
Type: CAZyme
Location: 49622 - 54877 (+)
Gene ID: HRGMv2_4304_14_37
Type: CAZyme
Location: 55326 - 58814 (+)
Type: CAZyme
Location: 55326 - 58814 (+)
Gene ID: HRGMv2_4304_14_38
Type: pfam
Location: 58816 - 60225 (+)
Type: pfam
Location: 58816 - 60225 (+)
Gene ID: HRGMv2_4304_14_39
Type: CAZyme
Location: 60763 - 70584 (+)
Type: CAZyme
Location: 60763 - 70584 (+)
Gene ID: HRGMv2_4304_14_40
Type:
Location: 70733 - 71710 (-)
Type:
Location: 70733 - 71710 (-)
Gene ID: HRGMv2_4304_14_41
Type: TC
Location: 72231 - 72893 (+)
Type: TC
Location: 72231 - 72893 (+)
Gene ID: HRGMv2_4304_14_42
Type: TC
Location: 72985 - 73209 (+)
Type: TC
Location: 72985 - 73209 (+)
Gene ID: HRGMv2_4304_14_43
Type: pfam
Location: 73229 - 73729 (+)
Type: pfam
Location: 73229 - 73729 (+)
Gene ID: HRGMv2_4304_14_44
Type: pfam
Location: 73710 - 74213 (+)
Type: pfam
Location: 73710 - 74213 (+)
Gene ID: HRGMv2_4304_14_45
Type: TC
Location: 74219 - 75913 (+)
Type: TC
Location: 74219 - 75913 (+)
Gene ID: HRGMv2_4304_14_46
Type: TC
Location: 75873 - 76625 (+)
Type: TC
Location: 75873 - 76625 (+)
Gene ID: HRGMv2_4304_14_47
Type: TC
Location: 76634 - 78040 (+)
Type: TC
Location: 76634 - 78040 (+)
Gene ID: HRGMv2_4304_14_48
Type: TC
Location: 78060 - 78476 (+)
Type: TC
Location: 78060 - 78476 (+)
Gene ID: HRGMv2_4304_14_49
Type: TC
Location: 78785 - 80425 (+)
Type: TC
Location: 78785 - 80425 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4304_14_42 | vegetarian > vegan | 1.36470 | 0.02695 |