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Cluster: HRGMv2_4304_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4304_14 HRGMv2_4304_14_17 10095 11672 - 9.B.33.1.1
NULL(UNKNOWN) HRGMv2_4304_14 HRGMv2_4304_14_18 11618 11863 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4304_14 HRGMv2_4304_14_19 12074 13450 + SBP_bac_1
TC HRGMv2_4304_14 HRGMv2_4304_14_20 13649 14515 + 3.A.1.1.28
TC HRGMv2_4304_14 HRGMv2_4304_14_21 14515 15351 + 3.A.1.1.39
CAZyme HRGMv2_4304_14 HRGMv2_4304_14_22 15386 18184 + GH38
pfam HRGMv2_4304_14 HRGMv2_4304_14_23 18230 19216 + Hydrolase | HAD_2
CAZyme HRGMv2_4304_14 HRGMv2_4304_14_24 19239 24170 + GH141
pfam HRGMv2_4304_14 HRGMv2_4304_14_25 24184 25125 + PMI_typeI_cat | MPI_cupin_dom
CAZyme HRGMv2_4304_14 HRGMv2_4304_14_26 25238 30058 + GH141
CAZyme HRGMv2_4304_14 HRGMv2_4304_14_27 30106 35106 + CBM47 | GH29
Gene ID: HRGMv2_4304_14_17
Type: TC
Location: 10095 - 11672 (-)
Gene ID: HRGMv2_4304_14_18
Type:
Location: 11618 - 11863 (-)
Gene ID: HRGMv2_4304_14_19
Type: STP
Location: 12074 - 13450 (+)
Gene ID: HRGMv2_4304_14_20
Type: TC
Location: 13649 - 14515 (+)
Gene ID: HRGMv2_4304_14_21
Type: TC
Location: 14515 - 15351 (+)
Gene ID: HRGMv2_4304_14_22
Type: CAZyme
Location: 15386 - 18184 (+)
Gene ID: HRGMv2_4304_14_23
Type: pfam
Location: 18230 - 19216 (+)
Gene ID: HRGMv2_4304_14_24
Type: CAZyme
Location: 19239 - 24170 (+)
Gene ID: HRGMv2_4304_14_25
Type: pfam
Location: 24184 - 25125 (+)
Gene ID: HRGMv2_4304_14_26
Type: CAZyme
Location: 25238 - 30058 (+)
Gene ID: HRGMv2_4304_14_27
Type: CAZyme
Location: 30106 - 35106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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