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Cluster: HRGMv2_4304_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_13 HRGMv2_4304_13_38 49314 51161 - GH13_4
CAZyme HRGMv2_4304_13 HRGMv2_4304_13_39 51172 52500 - GH32
TC HRGMv2_4304_13 HRGMv2_4304_13_40 52525 53385 - 3.A.1.1.28
TC HRGMv2_4304_13 HRGMv2_4304_13_41 53385 54257 - 3.A.1.1.45
TC HRGMv2_4304_13 HRGMv2_4304_13_42 54274 55650 - 3.A.1.1.45
TF HRGMv2_4304_13 HRGMv2_4304_13_43 56050 57099 + LacI
TF HRGMv2_4304_13 HRGMv2_4304_13_44 57196 58245 - LacI
TC HRGMv2_4304_13 HRGMv2_4304_13_45 58645 60021 + 3.A.1.1.45
TC HRGMv2_4304_13 HRGMv2_4304_13_46 60038 60910 + 3.A.1.1.45
TC HRGMv2_4304_13 HRGMv2_4304_13_47 60910 61770 + 3.A.1.1.28
CAZyme HRGMv2_4304_13 HRGMv2_4304_13_48 61795 63123 + GH32
CAZyme HRGMv2_4304_13 HRGMv2_4304_13_49 63134 64981 + GH13_4
Gene ID: HRGMv2_4304_13_38
Type: CAZyme
Location: 49314 - 51161 (-)
Gene ID: HRGMv2_4304_13_39
Type: CAZyme
Location: 51172 - 52500 (-)
Gene ID: HRGMv2_4304_13_40
Type: TC
Location: 52525 - 53385 (-)
Gene ID: HRGMv2_4304_13_41
Type: TC
Location: 53385 - 54257 (-)
Gene ID: HRGMv2_4304_13_42
Type: TC
Location: 54274 - 55650 (-)
Gene ID: HRGMv2_4304_13_43
Type: TF
Location: 56050 - 57099 (+)
Gene ID: HRGMv2_4304_13_44
Type: TF
Location: 57196 - 58245 (-)
Gene ID: HRGMv2_4304_13_45
Type: TC
Location: 58645 - 60021 (+)
Gene ID: HRGMv2_4304_13_46
Type: TC
Location: 60038 - 60910 (+)
Gene ID: HRGMv2_4304_13_47
Type: TC
Location: 60910 - 61770 (+)
Gene ID: HRGMv2_4304_13_48
Type: CAZyme
Location: 61795 - 63123 (+)
Gene ID: HRGMv2_4304_13_49
Type: CAZyme
Location: 63134 - 64981 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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