Cluster: HRGMv2_4304_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_1 | HRGMv2_4304_1_72 | 105505 | 106629 | + | GT28 |
| pfam | HRGMv2_4304_1 | HRGMv2_4304_1_73 | 106629 | 107240 | + | G3P_acyltransf |
| TC | HRGMv2_4304_1 | HRGMv2_4304_1_74 | 107436 | 109865 | + | 3.A.3.6.10 |
| STP | HRGMv2_4304_1 | HRGMv2_4304_1_75 | 109885 | 112341 | - | HATPase_c | HisKA | Response_reg | Response_reg |
| TF | HRGMv2_4304_1 | HRGMv2_4304_1_76 | 112570 | 114030 | + | GntR | GntR |
| TC | HRGMv2_4304_1 | HRGMv2_4304_1_77 | 114294 | 115562 | + | 3.A.1.132.1 |
| TC | HRGMv2_4304_1 | HRGMv2_4304_1_78 | 115559 | 116422 | + | 3.A.1.132.1 |
Gene ID: HRGMv2_4304_1_72
Type: CAZyme
Location: 105505 - 106629 (+)
Type: CAZyme
Location: 105505 - 106629 (+)
Gene ID: HRGMv2_4304_1_73
Type: pfam
Location: 106629 - 107240 (+)
Type: pfam
Location: 106629 - 107240 (+)
Gene ID: HRGMv2_4304_1_74
Type: TC
Location: 107436 - 109865 (+)
Type: TC
Location: 107436 - 109865 (+)
Gene ID: HRGMv2_4304_1_75
Type: STP
Location: 109885 - 112341 (-)
Type: STP
Location: 109885 - 112341 (-)
Gene ID: HRGMv2_4304_1_76
Type: TF
Location: 112570 - 114030 (+)
Type: TF
Location: 112570 - 114030 (+)
Gene ID: HRGMv2_4304_1_77
Type: TC
Location: 114294 - 115562 (+)
Type: TC
Location: 114294 - 115562 (+)
Gene ID: HRGMv2_4304_1_78
Type: TC
Location: 115559 - 116422 (+)
Type: TC
Location: 115559 - 116422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.