Cluster: HRGMv2_4304_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_10 | HRGMv2_4304_10_55 | 68904 | 70664 | + | 8.A.59.2.1 |
| STP | HRGMv2_4304_10 | HRGMv2_4304_10_56 | 70648 | 71892 | + | SBP_bac_1 |
| TF | HRGMv2_4304_10 | HRGMv2_4304_10_57 | 72177 | 73784 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4304_10 | HRGMv2_4304_10_58 | 73903 | 80205 | + | CBM37 | GH141 |
| pfam | HRGMv2_4304_10 | HRGMv2_4304_10_59 | 80423 | 81457 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_3 |
| CAZyme | HRGMv2_4304_10 | HRGMv2_4304_10_60 | 81468 | 82739 | + | GH3 |
Gene ID: HRGMv2_4304_10_55
Type: TC
Location: 68904 - 70664 (+)
Type: TC
Location: 68904 - 70664 (+)
Gene ID: HRGMv2_4304_10_56
Type: STP
Location: 70648 - 71892 (+)
Type: STP
Location: 70648 - 71892 (+)
Gene ID: HRGMv2_4304_10_57
Type: TF
Location: 72177 - 73784 (+)
Type: TF
Location: 72177 - 73784 (+)
Gene ID: HRGMv2_4304_10_58
Type: CAZyme
Location: 73903 - 80205 (+)
Type: CAZyme
Location: 73903 - 80205 (+)
Gene ID: HRGMv2_4304_10_59
Type: pfam
Location: 80423 - 81457 (+)
Type: pfam
Location: 80423 - 81457 (+)
Gene ID: HRGMv2_4304_10_60
Type: CAZyme
Location: 81468 - 82739 (+)
Type: CAZyme
Location: 81468 - 82739 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.