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Cluster: HRGMv2_4304_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_10 HRGMv2_4304_10_39 39499 42534 + GH95
NULL(UNKNOWN) HRGMv2_4304_10 HRGMv2_4304_10_40 42552 44297 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4304_10 HRGMv2_4304_10_41 44270 44491 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4304_10 HRGMv2_4304_10_42 44507 46441 + GH120
CAZyme HRGMv2_4304_10 HRGMv2_4304_10_43 46589 53404 + CBM32 | GH101
TF HRGMv2_4304_10 HRGMv2_4304_10_44 53571 55073 - HTH_AraC | HTH_AraC
TC HRGMv2_4304_10 HRGMv2_4304_10_45 55066 56865 - 8.A.59.2.1
STP HRGMv2_4304_10 HRGMv2_4304_10_46 57097 58353 + SBP_bac_1
STP HRGMv2_4304_10 HRGMv2_4304_10_47 58484 59869 + SBP_bac_1
TC HRGMv2_4304_10 HRGMv2_4304_10_48 60040 60942 + 3.A.1.1.34
TC HRGMv2_4304_10 HRGMv2_4304_10_49 60955 61806 + 3.A.1.1.47
Gene ID: HRGMv2_4304_10_39
Type: CAZyme
Location: 39499 - 42534 (+)
Gene ID: HRGMv2_4304_10_40
Type:
Location: 42552 - 44297 (+)
Gene ID: HRGMv2_4304_10_41
Type:
Location: 44270 - 44491 (+)
Gene ID: HRGMv2_4304_10_42
Type: CAZyme
Location: 44507 - 46441 (+)
Gene ID: HRGMv2_4304_10_43
Type: CAZyme
Location: 46589 - 53404 (+)
Gene ID: HRGMv2_4304_10_44
Type: TF
Location: 53571 - 55073 (-)
Gene ID: HRGMv2_4304_10_45
Type: TC
Location: 55066 - 56865 (-)
Gene ID: HRGMv2_4304_10_46
Type: STP
Location: 57097 - 58353 (+)
Gene ID: HRGMv2_4304_10_47
Type: STP
Location: 58484 - 59869 (+)
Gene ID: HRGMv2_4304_10_48
Type: TC
Location: 60040 - 60942 (+)
Gene ID: HRGMv2_4304_10_49
Type: TC
Location: 60955 - 61806 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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