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Cluster: HRGMv2_4304_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_8 HRGMv2_4304_8_80 101184 103448 + GH35
STP HRGMv2_4304_8 HRGMv2_4304_8_81 103599 105317 + SBP_bac_1
TC HRGMv2_4304_8 HRGMv2_4304_8_82 105349 106296 + 3.A.1.1.9
TC HRGMv2_4304_8 HRGMv2_4304_8_83 106308 107192 + 3.A.1.1.9
CAZyme HRGMv2_4304_8 HRGMv2_4304_8_84 107203 109233 + GH115
STP HRGMv2_4304_8 HRGMv2_4304_8_85 109320 111110 + HATPase_c | dCache_1
TF HRGMv2_4304_8 HRGMv2_4304_8_86 111088 112473 + HTH_AraC
CAZyme HRGMv2_4304_8 HRGMv2_4304_8_87 112556 114160 + GH28
TF HRGMv2_4304_8 HRGMv2_4304_8_88 114524 115204 + Trans_reg_C
STP HRGMv2_4304_8 HRGMv2_4304_8_89 115201 117174 + HATPase_c | HisKA
TC HRGMv2_4304_8 HRGMv2_4304_8_90 117321 118340 + 9.B.34.1.2
Gene ID: HRGMv2_4304_8_80
Type: CAZyme
Location: 101184 - 103448 (+)
Gene ID: HRGMv2_4304_8_81
Type: STP
Location: 103599 - 105317 (+)
Gene ID: HRGMv2_4304_8_82
Type: TC
Location: 105349 - 106296 (+)
Gene ID: HRGMv2_4304_8_83
Type: TC
Location: 106308 - 107192 (+)
Gene ID: HRGMv2_4304_8_84
Type: CAZyme
Location: 107203 - 109233 (+)
Gene ID: HRGMv2_4304_8_85
Type: STP
Location: 109320 - 111110 (+)
Gene ID: HRGMv2_4304_8_86
Type: TF
Location: 111088 - 112473 (+)
Gene ID: HRGMv2_4304_8_87
Type: CAZyme
Location: 112556 - 114160 (+)
Gene ID: HRGMv2_4304_8_88
Type: TF
Location: 114524 - 115204 (+)
Gene ID: HRGMv2_4304_8_89
Type: STP
Location: 115201 - 117174 (+)
Gene ID: HRGMv2_4304_8_90
Type: TC
Location: 117321 - 118340 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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