Cluster: HRGMv2_4304_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_7 | HRGMv2_4304_7_19 | 15753 | 16913 | - | 3.A.4.1.2 |
| NULL(UNKNOWN) | HRGMv2_4304_7 | HRGMv2_4304_7_20 | 16933 | 17148 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4304_7 | HRGMv2_4304_7_21 | 17153 | 18328 | - | 3.A.4.1.2 |
| TF | HRGMv2_4304_7 | HRGMv2_4304_7_22 | 18415 | 18909 | - | MarR |
| TC | HRGMv2_4304_7 | HRGMv2_4304_7_23 | 19006 | 20661 | - | 3.A.1.209.1 |
| TF | HRGMv2_4304_7 | HRGMv2_4304_7_24 | 20863 | 21894 | - | HTH_5 |
| TF | HRGMv2_4304_7 | HRGMv2_4304_7_25 | 22043 | 22984 | - | HTH_AraC |
| TC | HRGMv2_4304_7 | HRGMv2_4304_7_26 | 23127 | 24131 | - | 3.A.1.2.6 |
| pfam | HRGMv2_4304_7 | HRGMv2_4304_7_27 | 24325 | 24765 | - | YqeY |
| TC | HRGMv2_4304_7 | HRGMv2_4304_7_28 | 25003 | 27522 | - | 9.B.74.1.4 |
| pfam | HRGMv2_4304_7 | HRGMv2_4304_7_29 | 27559 | 29667 | - | MMPL | MMPL |
| STP | HRGMv2_4304_7 | HRGMv2_4304_7_30 | 29850 | 30458 | + | TetR_N |
| CAZyme | HRGMv2_4304_7 | HRGMv2_4304_7_31 | 30549 | 34364 | - | GH3 |
Gene ID: HRGMv2_4304_7_19
Type: TC
Location: 15753 - 16913 (-)
Type: TC
Location: 15753 - 16913 (-)
Gene ID: HRGMv2_4304_7_20
Type:
Location: 16933 - 17148 (-)
Type:
Location: 16933 - 17148 (-)
Gene ID: HRGMv2_4304_7_21
Type: TC
Location: 17153 - 18328 (-)
Type: TC
Location: 17153 - 18328 (-)
Gene ID: HRGMv2_4304_7_22
Type: TF
Location: 18415 - 18909 (-)
Type: TF
Location: 18415 - 18909 (-)
Gene ID: HRGMv2_4304_7_23
Type: TC
Location: 19006 - 20661 (-)
Type: TC
Location: 19006 - 20661 (-)
Gene ID: HRGMv2_4304_7_24
Type: TF
Location: 20863 - 21894 (-)
Type: TF
Location: 20863 - 21894 (-)
Gene ID: HRGMv2_4304_7_25
Type: TF
Location: 22043 - 22984 (-)
Type: TF
Location: 22043 - 22984 (-)
Gene ID: HRGMv2_4304_7_26
Type: TC
Location: 23127 - 24131 (-)
Type: TC
Location: 23127 - 24131 (-)
Gene ID: HRGMv2_4304_7_27
Type: pfam
Location: 24325 - 24765 (-)
Type: pfam
Location: 24325 - 24765 (-)
Gene ID: HRGMv2_4304_7_28
Type: TC
Location: 25003 - 27522 (-)
Type: TC
Location: 25003 - 27522 (-)
Gene ID: HRGMv2_4304_7_29
Type: pfam
Location: 27559 - 29667 (-)
Type: pfam
Location: 27559 - 29667 (-)
Gene ID: HRGMv2_4304_7_30
Type: STP
Location: 29850 - 30458 (+)
Type: STP
Location: 29850 - 30458 (+)
Gene ID: HRGMv2_4304_7_31
Type: CAZyme
Location: 30549 - 34364 (-)
Type: CAZyme
Location: 30549 - 34364 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.