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Cluster: HRGMv2_4304_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4304_6 HRGMv2_4304_6_14 20053 21690 - 3.A.1.121.4
pfam HRGMv2_4304_6 HRGMv2_4304_6_15 22893 23759 + ATLF
TC HRGMv2_4304_6 HRGMv2_4304_6_16 23926 25788 + 9.B.18.2.1
STP HRGMv2_4304_6 HRGMv2_4304_6_17 25808 26944 + Aminotran_1_2
TC HRGMv2_4304_6 HRGMv2_4304_6_18 26983 29229 + 9.B.18.1.3
pfam HRGMv2_4304_6 HRGMv2_4304_6_19 29219 29842 + PglD_N
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_20 29906 31000 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_21 31060 32028 + GT2
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_22 32050 33180 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_23 33203 34249 + GT2
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_24 34296 35282 + GT2
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_25 35349 36455 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_26 36439 37341 + GT2
TC HRGMv2_4304_6 HRGMv2_4304_6_27 37356 38465 + 9.B.183.1.9
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_28 38475 39671 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_29 39673 40407 + GT32
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_30 40404 41543 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_31 41536 42687 + GT4
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_32 42677 43675 + GT2
pfam HRGMv2_4304_6 HRGMv2_4304_6_33 43893 45050 + PS_pyruv_trans
CAZyme HRGMv2_4304_6 HRGMv2_4304_6_34 45058 46185 + GH105
TC HRGMv2_4304_6 HRGMv2_4304_6_35 46191 47723 + 2.A.66.1.40
Gene ID: HRGMv2_4304_6_14
Type: TC
Location: 20053 - 21690 (-)
Gene ID: HRGMv2_4304_6_15
Type: pfam
Location: 22893 - 23759 (+)
Gene ID: HRGMv2_4304_6_16
Type: TC
Location: 23926 - 25788 (+)
Gene ID: HRGMv2_4304_6_17
Type: STP
Location: 25808 - 26944 (+)
Gene ID: HRGMv2_4304_6_18
Type: TC
Location: 26983 - 29229 (+)
Gene ID: HRGMv2_4304_6_19
Type: pfam
Location: 29219 - 29842 (+)
Gene ID: HRGMv2_4304_6_20
Type: CAZyme
Location: 29906 - 31000 (+)
Gene ID: HRGMv2_4304_6_21
Type: CAZyme
Location: 31060 - 32028 (+)
Gene ID: HRGMv2_4304_6_22
Type: CAZyme
Location: 32050 - 33180 (+)
Gene ID: HRGMv2_4304_6_23
Type: CAZyme
Location: 33203 - 34249 (+)
Gene ID: HRGMv2_4304_6_24
Type: CAZyme
Location: 34296 - 35282 (+)
Gene ID: HRGMv2_4304_6_25
Type: CAZyme
Location: 35349 - 36455 (+)
Gene ID: HRGMv2_4304_6_26
Type: CAZyme
Location: 36439 - 37341 (+)
Gene ID: HRGMv2_4304_6_27
Type: TC
Location: 37356 - 38465 (+)
Gene ID: HRGMv2_4304_6_28
Type: CAZyme
Location: 38475 - 39671 (+)
Gene ID: HRGMv2_4304_6_29
Type: CAZyme
Location: 39673 - 40407 (+)
Gene ID: HRGMv2_4304_6_30
Type: CAZyme
Location: 40404 - 41543 (+)
Gene ID: HRGMv2_4304_6_31
Type: CAZyme
Location: 41536 - 42687 (+)
Gene ID: HRGMv2_4304_6_32
Type: CAZyme
Location: 42677 - 43675 (+)
Gene ID: HRGMv2_4304_6_33
Type: pfam
Location: 43893 - 45050 (+)
Gene ID: HRGMv2_4304_6_34
Type: CAZyme
Location: 45058 - 46185 (+)
Gene ID: HRGMv2_4304_6_35
Type: TC
Location: 46191 - 47723 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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