Cluster: HRGMv2_4304_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4304
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_6 | HRGMv2_4304_6_3 | 2142 | 7187 | + | GH84 |
| CAZyme | HRGMv2_4304_6 | HRGMv2_4304_6_4 | 7313 | 9475 | + | GH112 |
| CAZyme | HRGMv2_4304_6 | HRGMv2_4304_6_5 | 9478 | 11376 | + | GH20 |
| TF | HRGMv2_4304_6 | HRGMv2_4304_6_6 | 11373 | 12296 | - | HTH_AraC | HTH_AraC |
| STP | HRGMv2_4304_6 | HRGMv2_4304_6_7 | 12627 | 14006 | + | SBP_bac_1 |
| TC | HRGMv2_4304_6 | HRGMv2_4304_6_8 | 14122 | 15024 | + | 3.A.1.1.25 |
| TC | HRGMv2_4304_6 | HRGMv2_4304_6_9 | 15040 | 15924 | + | 3.A.1.1.47 |
Gene ID: HRGMv2_4304_6_3
Type: CAZyme
Location: 2142 - 7187 (+)
Type: CAZyme
Location: 2142 - 7187 (+)
Gene ID: HRGMv2_4304_6_4
Type: CAZyme
Location: 7313 - 9475 (+)
Type: CAZyme
Location: 7313 - 9475 (+)
Gene ID: HRGMv2_4304_6_5
Type: CAZyme
Location: 9478 - 11376 (+)
Type: CAZyme
Location: 9478 - 11376 (+)
Gene ID: HRGMv2_4304_6_6
Type: TF
Location: 11373 - 12296 (-)
Type: TF
Location: 11373 - 12296 (-)
Gene ID: HRGMv2_4304_6_7
Type: STP
Location: 12627 - 14006 (+)
Type: STP
Location: 12627 - 14006 (+)
Gene ID: HRGMv2_4304_6_8
Type: TC
Location: 14122 - 15024 (+)
Type: TC
Location: 14122 - 15024 (+)
Gene ID: HRGMv2_4304_6_9
Type: TC
Location: 15040 - 15924 (+)
Type: TC
Location: 15040 - 15924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.