Cluster: HRGMv2_4304_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_01556
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_5 | HRGMv2_4304_5_70 | 108217 | 109947 | - | 8.A.59.2.1 |
| STP | HRGMv2_4304_5 | HRGMv2_4304_5_71 | 109944 | 111614 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4304_5 | HRGMv2_4304_5_72 | 111906 | 117185 | + | CBM67 | GH78 |
| TF | HRGMv2_4304_5 | HRGMv2_4304_5_73 | 117367 | 117801 | + | MarR |
| TC | HRGMv2_4304_5 | HRGMv2_4304_5_74 | 117803 | 119137 | + | 2.A.66.1.7 |
Gene ID: HRGMv2_4304_5_70
Type: TC
Location: 108217 - 109947 (-)
Type: TC
Location: 108217 - 109947 (-)
Gene ID: HRGMv2_4304_5_71
Type: STP
Location: 109944 - 111614 (-)
Type: STP
Location: 109944 - 111614 (-)
Gene ID: HRGMv2_4304_5_72
Type: CAZyme
Location: 111906 - 117185 (+)
Type: CAZyme
Location: 111906 - 117185 (+)
Gene ID: HRGMv2_4304_5_73
Type: TF
Location: 117367 - 117801 (+)
Type: TF
Location: 117367 - 117801 (+)
Gene ID: HRGMv2_4304_5_74
Type: TC
Location: 117803 - 119137 (+)
Type: TC
Location: 117803 - 119137 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.