Cluster: HRGMv2_4304_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_00835
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_5 | HRGMv2_4304_5_53 | 83116 | 88965 | + | CBM67 | GH78 |
| TF | HRGMv2_4304_5 | HRGMv2_4304_5_54 | 89208 | 90065 | - | HTH_6 |
| TC | HRGMv2_4304_5 | HRGMv2_4304_5_55 | 90378 | 91289 | + | 3.A.1.1.36 |
| TC | HRGMv2_4304_5 | HRGMv2_4304_5_56 | 91286 | 92116 | + | 3.A.1.1.17 |
Gene ID: HRGMv2_4304_5_53
Type: CAZyme
Location: 83116 - 88965 (+)
Type: CAZyme
Location: 83116 - 88965 (+)
Gene ID: HRGMv2_4304_5_54
Type: TF
Location: 89208 - 90065 (-)
Type: TF
Location: 89208 - 90065 (-)
Gene ID: HRGMv2_4304_5_55
Type: TC
Location: 90378 - 91289 (+)
Type: TC
Location: 90378 - 91289 (+)
Gene ID: HRGMv2_4304_5_56
Type: TC
Location: 91286 - 92116 (+)
Type: TC
Location: 91286 - 92116 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.