dbCAN Logo

Cluster: HRGMv2_4304_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4304_5 HRGMv2_4304_5_21 37760 41848 + CBM67 | GH78
TF HRGMv2_4304_5 HRGMv2_4304_5_22 41922 42974 - HTH_AraC
CAZyme HRGMv2_4304_5 HRGMv2_4304_5_23 43248 46754 + CBM67 | GH78
pfam HRGMv2_4304_5 HRGMv2_4304_5_24 46854 47285 - DUF6442
TF HRGMv2_4304_5 HRGMv2_4304_5_25 47282 47485 - HTH_3
CAZyme HRGMv2_4304_5 HRGMv2_4304_5_26 47677 51690 + CBM67 | GH78
pfam HRGMv2_4304_5 HRGMv2_4304_5_27 53201 53959 - ABC2_membrane_2
TC HRGMv2_4304_5 HRGMv2_4304_5_28 53956 54873 - 3.A.1.131.1
Gene ID: HRGMv2_4304_5_21
Type: CAZyme
Location: 37760 - 41848 (+)
Gene ID: HRGMv2_4304_5_22
Type: TF
Location: 41922 - 42974 (-)
Gene ID: HRGMv2_4304_5_23
Type: CAZyme
Location: 43248 - 46754 (+)
Gene ID: HRGMv2_4304_5_24
Type: pfam
Location: 46854 - 47285 (-)
Gene ID: HRGMv2_4304_5_25
Type: TF
Location: 47282 - 47485 (-)
Gene ID: HRGMv2_4304_5_26
Type: CAZyme
Location: 47677 - 51690 (+)
Gene ID: HRGMv2_4304_5_27
Type: pfam
Location: 53201 - 53959 (-)
Gene ID: HRGMv2_4304_5_28
Type: TC
Location: 53956 - 54873 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List