Cluster: HRGMv2_4304_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_129 | 185414 | 187225 | - | GT2 |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_130 | 187250 | 188011 | - | 3.A.1.103.1 |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_131 | 188025 | 188813 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_132 | 188810 | 189817 | - | GT2 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_133 | 189814 | 190941 | - | GT2 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_134 | 190934 | 192079 | - | GT2 |
| pfam | HRGMv2_4304_3 | HRGMv2_4304_3_135 | 192273 | 193574 | + | UDPG_MGDP_dh | ApbA | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| NULL(UNKNOWN) | HRGMv2_4304_3 | HRGMv2_4304_3_136 | 193502 | 193648 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_137 | 193645 | 194829 | - | GT2 |
| CAZyme | HRGMv2_4304_3 | HRGMv2_4304_3_138 | 194836 | 195516 | - | GT2 |
| TC | HRGMv2_4304_3 | HRGMv2_4304_3_139 | 195609 | 197015 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_4304_3_129
Type: CAZyme
Location: 185414 - 187225 (-)
Type: CAZyme
Location: 185414 - 187225 (-)
Gene ID: HRGMv2_4304_3_130
Type: TC
Location: 187250 - 188011 (-)
Type: TC
Location: 187250 - 188011 (-)
Gene ID: HRGMv2_4304_3_131
Type: TC
Location: 188025 - 188813 (-)
Type: TC
Location: 188025 - 188813 (-)
Gene ID: HRGMv2_4304_3_132
Type: CAZyme
Location: 188810 - 189817 (-)
Type: CAZyme
Location: 188810 - 189817 (-)
Gene ID: HRGMv2_4304_3_133
Type: CAZyme
Location: 189814 - 190941 (-)
Type: CAZyme
Location: 189814 - 190941 (-)
Gene ID: HRGMv2_4304_3_134
Type: CAZyme
Location: 190934 - 192079 (-)
Type: CAZyme
Location: 190934 - 192079 (-)
Gene ID: HRGMv2_4304_3_135
Type: pfam
Location: 192273 - 193574 (+)
Type: pfam
Location: 192273 - 193574 (+)
Gene ID: HRGMv2_4304_3_136
Type:
Location: 193502 - 193648 (-)
Type:
Location: 193502 - 193648 (-)
Gene ID: HRGMv2_4304_3_137
Type: CAZyme
Location: 193645 - 194829 (-)
Type: CAZyme
Location: 193645 - 194829 (-)
Gene ID: HRGMv2_4304_3_138
Type: CAZyme
Location: 194836 - 195516 (-)
Type: CAZyme
Location: 194836 - 195516 (-)
Gene ID: HRGMv2_4304_3_139
Type: TC
Location: 195609 - 197015 (-)
Type: TC
Location: 195609 - 197015 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.