Cluster: HRGMv2_4304_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_01942
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_1 | HRGMv2_4304_1_42 | 47298 | 48071 | + | 3.A.7.11.1 |
| pfam | HRGMv2_4304_1 | HRGMv2_4304_1_43 | 48065 | 48949 | + | ParBc | HTH_ParB | ParB_dimer |
| pfam | HRGMv2_4304_1 | HRGMv2_4304_1_44 | 48976 | 49488 | + | DUF4446 |
| CAZyme | HRGMv2_4304_1 | HRGMv2_4304_1_45 | 50115 | 57344 | + | CBM51 | GH2 |
Gene ID: HRGMv2_4304_1_42
Type: TC
Location: 47298 - 48071 (+)
Type: TC
Location: 47298 - 48071 (+)
Gene ID: HRGMv2_4304_1_43
Type: pfam
Location: 48065 - 48949 (+)
Type: pfam
Location: 48065 - 48949 (+)
Gene ID: HRGMv2_4304_1_44
Type: pfam
Location: 48976 - 49488 (+)
Type: pfam
Location: 48976 - 49488 (+)
Gene ID: HRGMv2_4304_1_45
Type: CAZyme
Location: 50115 - 57344 (+)
Type: CAZyme
Location: 50115 - 57344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.