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Cluster: HRGMv2_4245_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4245_2 HRGMv2_4245_2_36 38126 39706 + 3.A.1.1.9
TC HRGMv2_4245_2 HRGMv2_4245_2_37 39723 40682 + 3.A.1.1.29
TC HRGMv2_4245_2 HRGMv2_4245_2_38 40698 41534 + 3.A.1.1.9
CAZyme HRGMv2_4245_2 HRGMv2_4245_2_39 41625 43157 + CBM91 | GH43_10
CAZyme HRGMv2_4245_2 HRGMv2_4245_2_40 43108 44889 + CBM91 | GH43_12
CAZyme HRGMv2_4245_2 HRGMv2_4245_2_41 44852 45532 + CE12
TC HRGMv2_4245_2 HRGMv2_4245_2_42 45544 47331 + 3.A.1.106.2
TC HRGMv2_4245_2 HRGMv2_4245_2_43 47338 47985 + 9.B.28.1.3
Gene ID: HRGMv2_4245_2_36
Type: TC
Location: 38126 - 39706 (+)
Gene ID: HRGMv2_4245_2_37
Type: TC
Location: 39723 - 40682 (+)
Gene ID: HRGMv2_4245_2_38
Type: TC
Location: 40698 - 41534 (+)
Gene ID: HRGMv2_4245_2_39
Type: CAZyme
Location: 41625 - 43157 (+)
Gene ID: HRGMv2_4245_2_40
Type: CAZyme
Location: 43108 - 44889 (+)
Gene ID: HRGMv2_4245_2_41
Type: CAZyme
Location: 44852 - 45532 (+)
Gene ID: HRGMv2_4245_2_42
Type: TC
Location: 45544 - 47331 (+)
Gene ID: HRGMv2_4245_2_43
Type: TC
Location: 47338 - 47985 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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