Cluster: HRGMv2_4245_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_01684
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_1 | HRGMv2_4245_1_109 | 129869 | 131170 | - | 3.A.1.121.4 |
| pfam | HRGMv2_4245_1 | HRGMv2_4245_1_110 | 131237 | 132148 | + | Exo_endo_phos |
| TC | HRGMv2_4245_1 | HRGMv2_4245_1_111 | 132159 | 133967 | + | 3.A.1.120.6 |
| CAZyme | HRGMv2_4245_1 | HRGMv2_4245_1_112 | 134005 | 135837 | + | GH13_11 |
| pfam | HRGMv2_4245_1 | HRGMv2_4245_1_113 | 135917 | 136399 | - | LuxS |
| TC | HRGMv2_4245_1 | HRGMv2_4245_1_114 | 136566 | 139175 | + | 3.A.3.2.21 |
Gene ID: HRGMv2_4245_1_109
Type: TC
Location: 129869 - 131170 (-)
Type: TC
Location: 129869 - 131170 (-)
Gene ID: HRGMv2_4245_1_110
Type: pfam
Location: 131237 - 132148 (+)
Type: pfam
Location: 131237 - 132148 (+)
Gene ID: HRGMv2_4245_1_111
Type: TC
Location: 132159 - 133967 (+)
Type: TC
Location: 132159 - 133967 (+)
Gene ID: HRGMv2_4245_1_112
Type: CAZyme
Location: 134005 - 135837 (+)
Type: CAZyme
Location: 134005 - 135837 (+)
Gene ID: HRGMv2_4245_1_113
Type: pfam
Location: 135917 - 136399 (-)
Type: pfam
Location: 135917 - 136399 (-)
Gene ID: HRGMv2_4245_1_114
Type: TC
Location: 136566 - 139175 (+)
Type: TC
Location: 136566 - 139175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.