Cluster: HRGMv2_4245_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_00086
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_35 | HRGMv2_4245_35_6 | 4098 | 5168 | - | 3.A.1.132.8 |
| pfam | HRGMv2_4245_35 | HRGMv2_4245_35_7 | 5140 | 6333 | - | NPCBM_assoc | NPCBM_assoc | NPCBM_assoc |
| CAZyme | HRGMv2_4245_35 | HRGMv2_4245_35_8 | 6739 | 8799 | - | CBM34 | GH13_39 |
| TC | HRGMv2_4245_35 | HRGMv2_4245_35_9 | 9131 | 10951 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_4245_35_6
Type: TC
Location: 4098 - 5168 (-)
Type: TC
Location: 4098 - 5168 (-)
Gene ID: HRGMv2_4245_35_7
Type: pfam
Location: 5140 - 6333 (-)
Type: pfam
Location: 5140 - 6333 (-)
Gene ID: HRGMv2_4245_35_8
Type: CAZyme
Location: 6739 - 8799 (-)
Type: CAZyme
Location: 6739 - 8799 (-)
Gene ID: HRGMv2_4245_35_9
Type: TC
Location: 9131 - 10951 (-)
Type: TC
Location: 9131 - 10951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.