Cluster: HRGMv2_4245_CGC47
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4245
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4245_31 | HRGMv2_4245_31_12 | 13429 | 15480 | + | GH3 |
| CAZyme | HRGMv2_4245_31 | HRGMv2_4245_31_13 | 15657 | 16532 | - | GH43_17 |
| TF | HRGMv2_4245_31 | HRGMv2_4245_31_14 | 16642 | 17532 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4245_31 | HRGMv2_4245_31_15 | 17713 | 19092 | + | 3.A.1.1.44 |
| TC | HRGMv2_4245_31 | HRGMv2_4245_31_16 | 19121 | 20074 | + | 3.A.1.1.11 |
| TC | HRGMv2_4245_31 | HRGMv2_4245_31_17 | 20080 | 20931 | + | 3.A.1.1.11 |
Gene ID: HRGMv2_4245_31_12
Type: CAZyme
Location: 13429 - 15480 (+)
Type: CAZyme
Location: 13429 - 15480 (+)
Gene ID: HRGMv2_4245_31_13
Type: CAZyme
Location: 15657 - 16532 (-)
Type: CAZyme
Location: 15657 - 16532 (-)
Gene ID: HRGMv2_4245_31_14
Type: TF
Location: 16642 - 17532 (+)
Type: TF
Location: 16642 - 17532 (+)
Gene ID: HRGMv2_4245_31_15
Type: TC
Location: 17713 - 19092 (+)
Type: TC
Location: 17713 - 19092 (+)
Gene ID: HRGMv2_4245_31_16
Type: TC
Location: 19121 - 20074 (+)
Type: TC
Location: 19121 - 20074 (+)
Gene ID: HRGMv2_4245_31_17
Type: TC
Location: 20080 - 20931 (+)
Type: TC
Location: 20080 - 20931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.