Cluster: HRGMv2_4245_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_03834
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_22 | HRGMv2_4245_22_17 | 20671 | 23259 | - | 3.A.9.1.2 |
| pfam | HRGMv2_4245_22 | HRGMv2_4245_22_18 | 23475 | 24014 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_3 |
| TC | HRGMv2_4245_22 | HRGMv2_4245_22_19 | 24115 | 25437 | - | 2.A.66.1.34 |
| CAZyme | HRGMv2_4245_22 | HRGMv2_4245_22_20 | 25441 | 26424 | - | GH109 |
Gene ID: HRGMv2_4245_22_17
Type: TC
Location: 20671 - 23259 (-)
Type: TC
Location: 20671 - 23259 (-)
Gene ID: HRGMv2_4245_22_18
Type: pfam
Location: 23475 - 24014 (+)
Type: pfam
Location: 23475 - 24014 (+)
Gene ID: HRGMv2_4245_22_19
Type: TC
Location: 24115 - 25437 (-)
Type: TC
Location: 24115 - 25437 (-)
Gene ID: HRGMv2_4245_22_20
Type: CAZyme
Location: 25441 - 26424 (-)
Type: CAZyme
Location: 25441 - 26424 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.