Cluster: HRGMv2_4245_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_09907
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_1 | HRGMv2_4245_1_84 | 106189 | 107919 | + | 3.A.1.135.7 |
| TC | HRGMv2_4245_1 | HRGMv2_4245_1_85 | 107912 | 109657 | + | 3.A.1.135.5 |
| pfam | HRGMv2_4245_1 | HRGMv2_4245_1_86 | 109765 | 110514 | - | APH | EcKL |
| CAZyme | HRGMv2_4245_1 | HRGMv2_4245_1_87 | 110662 | 112572 | - | CBM48 | GH13_9 |
| CAZyme | HRGMv2_4245_1 | HRGMv2_4245_1_88 | 112577 | 113911 | - | GH13_20 |
Gene ID: HRGMv2_4245_1_84
Type: TC
Location: 106189 - 107919 (+)
Type: TC
Location: 106189 - 107919 (+)
Gene ID: HRGMv2_4245_1_85
Type: TC
Location: 107912 - 109657 (+)
Type: TC
Location: 107912 - 109657 (+)
Gene ID: HRGMv2_4245_1_86
Type: pfam
Location: 109765 - 110514 (-)
Type: pfam
Location: 109765 - 110514 (-)
Gene ID: HRGMv2_4245_1_87
Type: CAZyme
Location: 110662 - 112572 (-)
Type: CAZyme
Location: 110662 - 112572 (-)
Gene ID: HRGMv2_4245_1_88
Type: CAZyme
Location: 112577 - 113911 (-)
Type: CAZyme
Location: 112577 - 113911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.