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Cluster: HRGMv2_4245_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4245_17 HRGMv2_4245_17_37 41173 42531 - 2.A.66.1.33
pfam HRGMv2_4245_17 HRGMv2_4245_17_38 42584 43087 - GreA_GreB | GreA_GreB_N
TC HRGMv2_4245_17 HRGMv2_4245_17_39 43269 44645 + 2.A.66.1.13
CAZyme HRGMv2_4245_17 HRGMv2_4245_17_40 44779 45912 - GH88
pfam HRGMv2_4245_17 HRGMv2_4245_17_41 45926 48016 - Hepar_II_III_C | Hepar_II_III_N
CAZyme HRGMv2_4245_17 HRGMv2_4245_17_42 48067 50100 - PL12
sulfatase HRGMv2_4245_17 HRGMv2_4245_17_43 50125 51528 - S1_9
STP HRGMv2_4245_17 HRGMv2_4245_17_44 51621 53282 - SBP_bac_1
TC HRGMv2_4245_17 HRGMv2_4245_17_45 53354 54244 - 3.A.1.1.10
TC HRGMv2_4245_17 HRGMv2_4245_17_46 54270 55238 - 3.A.1.1.10
Gene ID: HRGMv2_4245_17_37
Type: TC
Location: 41173 - 42531 (-)
Gene ID: HRGMv2_4245_17_38
Type: pfam
Location: 42584 - 43087 (-)
Gene ID: HRGMv2_4245_17_39
Type: TC
Location: 43269 - 44645 (+)
Gene ID: HRGMv2_4245_17_40
Type: CAZyme
Location: 44779 - 45912 (-)
Gene ID: HRGMv2_4245_17_41
Type: pfam
Location: 45926 - 48016 (-)
Gene ID: HRGMv2_4245_17_42
Type: CAZyme
Location: 48067 - 50100 (-)
Gene ID: HRGMv2_4245_17_43
Type: sulfatase
Location: 50125 - 51528 (-)
Gene ID: HRGMv2_4245_17_44
Type: STP
Location: 51621 - 53282 (-)
Gene ID: HRGMv2_4245_17_45
Type: TC
Location: 53354 - 54244 (-)
Gene ID: HRGMv2_4245_17_46
Type: TC
Location: 54270 - 55238 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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