Cluster: HRGMv2_4245_CGC35
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_06787
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_3 | 3349 | 4404 | - | 2.A.20.1.7 |
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_4 | 4419 | 5081 | - | 2.A.38.4.2 |
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_5 | 5110 | 6414 | - | 2.A.38.4.1 |
| NULL(UNKNOWN) | HRGMv2_4245_17 | HRGMv2_4245_17_6 | 6457 | 6882 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4245_17 | HRGMv2_4245_17_7 | 7131 | 8132 | - | GH179 |
| CAZyme | HRGMv2_4245_17 | HRGMv2_4245_17_8 | 8202 | 9521 | - | GH28 |
| CAZyme | HRGMv2_4245_17 | HRGMv2_4245_17_9 | 9525 | 12656 | - | GH38 |
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_10 | 12821 | 13675 | - | 3.A.1.1.11 |
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_11 | 13682 | 14611 | - | 3.A.1.1.11 |
| STP | HRGMv2_4245_17 | HRGMv2_4245_17_12 | 14723 | 16081 | - | SBP_bac_1 |
| TC | HRGMv2_4245_17 | HRGMv2_4245_17_13 | 16264 | 18033 | + | 8.A.59.2.1 |
| TF | HRGMv2_4245_17 | HRGMv2_4245_17_14 | 18026 | 19525 | + | HTH_AraC |
| CAZyme | HRGMv2_4245_17 | HRGMv2_4245_17_15 | 19557 | 20675 | + | GH105 |
Gene ID: HRGMv2_4245_17_3
Type: TC
Location: 3349 - 4404 (-)
Type: TC
Location: 3349 - 4404 (-)
Gene ID: HRGMv2_4245_17_4
Type: TC
Location: 4419 - 5081 (-)
Type: TC
Location: 4419 - 5081 (-)
Gene ID: HRGMv2_4245_17_5
Type: TC
Location: 5110 - 6414 (-)
Type: TC
Location: 5110 - 6414 (-)
Gene ID: HRGMv2_4245_17_6
Type:
Location: 6457 - 6882 (-)
Type:
Location: 6457 - 6882 (-)
Gene ID: HRGMv2_4245_17_7
Type: CAZyme
Location: 7131 - 8132 (-)
Type: CAZyme
Location: 7131 - 8132 (-)
Gene ID: HRGMv2_4245_17_8
Type: CAZyme
Location: 8202 - 9521 (-)
Type: CAZyme
Location: 8202 - 9521 (-)
Gene ID: HRGMv2_4245_17_9
Type: CAZyme
Location: 9525 - 12656 (-)
Type: CAZyme
Location: 9525 - 12656 (-)
Gene ID: HRGMv2_4245_17_10
Type: TC
Location: 12821 - 13675 (-)
Type: TC
Location: 12821 - 13675 (-)
Gene ID: HRGMv2_4245_17_11
Type: TC
Location: 13682 - 14611 (-)
Type: TC
Location: 13682 - 14611 (-)
Gene ID: HRGMv2_4245_17_12
Type: STP
Location: 14723 - 16081 (-)
Type: STP
Location: 14723 - 16081 (-)
Gene ID: HRGMv2_4245_17_13
Type: TC
Location: 16264 - 18033 (+)
Type: TC
Location: 16264 - 18033 (+)
Gene ID: HRGMv2_4245_17_14
Type: TF
Location: 18026 - 19525 (+)
Type: TF
Location: 18026 - 19525 (+)
Gene ID: HRGMv2_4245_17_15
Type: CAZyme
Location: 19557 - 20675 (+)
Type: CAZyme
Location: 19557 - 20675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.