dbCAN Logo

Cluster: HRGMv2_4245_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4245_15 HRGMv2_4245_15_31 37778 38467 + GT2
pfam HRGMv2_4245_15 HRGMv2_4245_15_32 38486 38854 + DUF2304
pfam HRGMv2_4245_15 HRGMv2_4245_15_33 38829 40436 + DUF2142
CAZyme HRGMv2_4245_15 HRGMv2_4245_15_34 40506 41459 + GT2
pfam HRGMv2_4245_15 HRGMv2_4245_15_35 41539 42096 + dTDP_sugar_isom
TC HRGMv2_4245_15 HRGMv2_4245_15_36 42110 42919 + 3.A.1.104.1
TC HRGMv2_4245_15 HRGMv2_4245_15_37 42941 44284 + 3.A.1.103.6
pfam HRGMv2_4245_15 HRGMv2_4245_15_38 44311 45198 + Methyltransf_11 | Methyltransf_25
CAZyme HRGMv2_4245_15 HRGMv2_4245_15_39 45176 48310 + GT2
Gene ID: HRGMv2_4245_15_31
Type: CAZyme
Location: 37778 - 38467 (+)
Gene ID: HRGMv2_4245_15_32
Type: pfam
Location: 38486 - 38854 (+)
Gene ID: HRGMv2_4245_15_33
Type: pfam
Location: 38829 - 40436 (+)
Gene ID: HRGMv2_4245_15_34
Type: CAZyme
Location: 40506 - 41459 (+)
Gene ID: HRGMv2_4245_15_35
Type: pfam
Location: 41539 - 42096 (+)
Gene ID: HRGMv2_4245_15_36
Type: TC
Location: 42110 - 42919 (+)
Gene ID: HRGMv2_4245_15_37
Type: TC
Location: 42941 - 44284 (+)
Gene ID: HRGMv2_4245_15_38
Type: pfam
Location: 44311 - 45198 (+)
Gene ID: HRGMv2_4245_15_39
Type: CAZyme
Location: 45176 - 48310 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List