Cluster: HRGMv2_4245_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4245
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4245_15 | HRGMv2_4245_15_13 | 11335 | 13962 | + | CBM48 | GH13_9 |
| TC | HRGMv2_4245_15 | HRGMv2_4245_15_14 | 14065 | 15015 | + | 1.A.23.2.1 |
| pfam | HRGMv2_4245_15 | HRGMv2_4245_15_15 | 14963 | 15970 | + | ROK |
| TF | HRGMv2_4245_15 | HRGMv2_4245_15_16 | 16104 | 17339 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4245_15 | HRGMv2_4245_15_17 | 17548 | 19818 | + | GH2 |
| TC | HRGMv2_4245_15 | HRGMv2_4245_15_18 | 19835 | 21244 | + | 2.A.2.3.1 |
| CAZyme | HRGMv2_4245_15 | HRGMv2_4245_15_19 | 21273 | 23519 | + | GH3 |
Gene ID: HRGMv2_4245_15_13
Type: CAZyme
Location: 11335 - 13962 (+)
Type: CAZyme
Location: 11335 - 13962 (+)
Gene ID: HRGMv2_4245_15_14
Type: TC
Location: 14065 - 15015 (+)
Type: TC
Location: 14065 - 15015 (+)
Gene ID: HRGMv2_4245_15_15
Type: pfam
Location: 14963 - 15970 (+)
Type: pfam
Location: 14963 - 15970 (+)
Gene ID: HRGMv2_4245_15_16
Type: TF
Location: 16104 - 17339 (-)
Type: TF
Location: 16104 - 17339 (-)
Gene ID: HRGMv2_4245_15_17
Type: CAZyme
Location: 17548 - 19818 (+)
Type: CAZyme
Location: 17548 - 19818 (+)
Gene ID: HRGMv2_4245_15_18
Type: TC
Location: 19835 - 21244 (+)
Type: TC
Location: 19835 - 21244 (+)
Gene ID: HRGMv2_4245_15_19
Type: CAZyme
Location: 21273 - 23519 (+)
Type: CAZyme
Location: 21273 - 23519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.