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Cluster: HRGMv2_4245_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4245_13 HRGMv2_4245_13_44 51378 53417 - GH73
TC HRGMv2_4245_13 HRGMv2_4245_13_45 53734 55146 - 3.B.1.1.6
TC HRGMv2_4245_13 HRGMv2_4245_13_46 55189 56334 - 3.B.1.1.2
TC HRGMv2_4245_13 HRGMv2_4245_13_47 56383 56784 - 3.B.1.1.2
pfam HRGMv2_4245_13 HRGMv2_4245_13_48 56806 57576 - OAD_gamma
TC HRGMv2_4245_13 HRGMv2_4245_13_49 57592 59046 - 3.B.1.1.5
NULL(UNKNOWN) HRGMv2_4245_13 HRGMv2_4245_13_50 59239 59868 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4245_13 HRGMv2_4245_13_51 59970 60815 - 2.A.115.1.5
peptidase HRGMv2_4245_13 HRGMv2_4245_13_52 60841 62082 - S11.UPW
TC HRGMv2_4245_13 HRGMv2_4245_13_53 62169 63050 - 2.A.115.1.5
Gene ID: HRGMv2_4245_13_44
Type: CAZyme
Location: 51378 - 53417 (-)
Gene ID: HRGMv2_4245_13_45
Type: TC
Location: 53734 - 55146 (-)
Gene ID: HRGMv2_4245_13_46
Type: TC
Location: 55189 - 56334 (-)
Gene ID: HRGMv2_4245_13_47
Type: TC
Location: 56383 - 56784 (-)
Gene ID: HRGMv2_4245_13_48
Type: pfam
Location: 56806 - 57576 (-)
Gene ID: HRGMv2_4245_13_49
Type: TC
Location: 57592 - 59046 (-)
Gene ID: HRGMv2_4245_13_50
Type:
Location: 59239 - 59868 (-)
Gene ID: HRGMv2_4245_13_51
Type: TC
Location: 59970 - 60815 (-)
Gene ID: HRGMv2_4245_13_52
Type: peptidase
Location: 60841 - 62082 (-)
Gene ID: HRGMv2_4245_13_53
Type: TC
Location: 62169 - 63050 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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