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Cluster: HRGMv2_4245_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4245_12 HRGMv2_4245_12_77 89011 89505 + 3.D.1.5.1
STP HRGMv2_4245_12 HRGMv2_4245_12_78 89511 90068 + HATPase_c
NULL(UNKNOWN) HRGMv2_4245_12 HRGMv2_4245_12_79 90095 90472 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4245_12 HRGMv2_4245_12_80 90485 92272 + 3.D.1.5.1
STP HRGMv2_4245_12 HRGMv2_4245_12_81 92290 94035 + Fer4
TC HRGMv2_4245_12 HRGMv2_4245_12_82 94325 95650 + 2.A.66.1.26
pfam HRGMv2_4245_12 HRGMv2_4245_12_83 95725 96537 - Polysacc_deac_1
CAZyme HRGMv2_4245_12 HRGMv2_4245_12_84 96551 97282 - GH105
Gene ID: HRGMv2_4245_12_77
Type: TC
Location: 89011 - 89505 (+)
Gene ID: HRGMv2_4245_12_78
Type: STP
Location: 89511 - 90068 (+)
Gene ID: HRGMv2_4245_12_79
Type:
Location: 90095 - 90472 (+)
Gene ID: HRGMv2_4245_12_80
Type: TC
Location: 90485 - 92272 (+)
Gene ID: HRGMv2_4245_12_81
Type: STP
Location: 92290 - 94035 (+)
Gene ID: HRGMv2_4245_12_82
Type: TC
Location: 94325 - 95650 (+)
Gene ID: HRGMv2_4245_12_83
Type: pfam
Location: 95725 - 96537 (-)
Gene ID: HRGMv2_4245_12_84
Type: CAZyme
Location: 96551 - 97282 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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