Cluster: HRGMv2_4245_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4245
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_12 | HRGMv2_4245_12_6 | 5030 | 6514 | - | 2.A.66.2.16 |
| pfam | HRGMv2_4245_12 | HRGMv2_4245_12_7 | 6535 | 7737 | - | Amino_oxidase | NAD_binding_8 |
| pfam | HRGMv2_4245_12 | HRGMv2_4245_12_8 | 7734 | 8978 | - | Wzy_C |
| CAZyme | HRGMv2_4245_12 | HRGMv2_4245_12_9 | 8996 | 10114 | - | GT4 |
| CAZyme | HRGMv2_4245_12 | HRGMv2_4245_12_10 | 10114 | 11049 | - | GT2 |
| pfam | HRGMv2_4245_12 | HRGMv2_4245_12_11 | 11042 | 11605 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_4245_12 | HRGMv2_4245_12_12 | 11616 | 12887 | - | GT4 |
| CAZyme | HRGMv2_4245_12 | HRGMv2_4245_12_13 | 12964 | 13725 | - | GT111 |
| CAZyme | HRGMv2_4245_12 | HRGMv2_4245_12_14 | 13718 | 14980 | - | GT4 |
| pfam | HRGMv2_4245_12 | HRGMv2_4245_12_15 | 15059 | 15307 | - | NTP_transferase |
| pfam | HRGMv2_4245_12 | HRGMv2_4245_12_16 | 15427 | 16677 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_4245_12 | HRGMv2_4245_12_17 | 16972 | 18480 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4245_12_6
Type: TC
Location: 5030 - 6514 (-)
Type: TC
Location: 5030 - 6514 (-)
Gene ID: HRGMv2_4245_12_7
Type: pfam
Location: 6535 - 7737 (-)
Type: pfam
Location: 6535 - 7737 (-)
Gene ID: HRGMv2_4245_12_8
Type: pfam
Location: 7734 - 8978 (-)
Type: pfam
Location: 7734 - 8978 (-)
Gene ID: HRGMv2_4245_12_9
Type: CAZyme
Location: 8996 - 10114 (-)
Type: CAZyme
Location: 8996 - 10114 (-)
Gene ID: HRGMv2_4245_12_10
Type: CAZyme
Location: 10114 - 11049 (-)
Type: CAZyme
Location: 10114 - 11049 (-)
Gene ID: HRGMv2_4245_12_11
Type: pfam
Location: 11042 - 11605 (-)
Type: pfam
Location: 11042 - 11605 (-)
Gene ID: HRGMv2_4245_12_12
Type: CAZyme
Location: 11616 - 12887 (-)
Type: CAZyme
Location: 11616 - 12887 (-)
Gene ID: HRGMv2_4245_12_13
Type: CAZyme
Location: 12964 - 13725 (-)
Type: CAZyme
Location: 12964 - 13725 (-)
Gene ID: HRGMv2_4245_12_14
Type: CAZyme
Location: 13718 - 14980 (-)
Type: CAZyme
Location: 13718 - 14980 (-)
Gene ID: HRGMv2_4245_12_15
Type: pfam
Location: 15059 - 15307 (-)
Type: pfam
Location: 15059 - 15307 (-)
Gene ID: HRGMv2_4245_12_16
Type: pfam
Location: 15427 - 16677 (-)
Type: pfam
Location: 15427 - 16677 (-)
Gene ID: HRGMv2_4245_12_17
Type: TC
Location: 16972 - 18480 (-)
Type: TC
Location: 16972 - 18480 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.