Cluster: HRGMv2_4245_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4245
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4245_8 | HRGMv2_4245_8_24 | 31833 | 33254 | - | 2.A.66.1.26 |
| TF | HRGMv2_4245_8 | HRGMv2_4245_8_25 | 33473 | 34315 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4245_8 | HRGMv2_4245_8_26 | 34428 | 35201 | + | PNP_UDP_1 |
| CAZyme | HRGMv2_4245_8 | HRGMv2_4245_8_27 | 35284 | 36279 | - | CE8 |
| CAZyme | HRGMv2_4245_8 | HRGMv2_4245_8_28 | 36452 | 38419 | + | CE12 |
Gene ID: HRGMv2_4245_8_24
Type: TC
Location: 31833 - 33254 (-)
Type: TC
Location: 31833 - 33254 (-)
Gene ID: HRGMv2_4245_8_25
Type: TF
Location: 33473 - 34315 (+)
Type: TF
Location: 33473 - 34315 (+)
Gene ID: HRGMv2_4245_8_26
Type: pfam
Location: 34428 - 35201 (+)
Type: pfam
Location: 34428 - 35201 (+)
Gene ID: HRGMv2_4245_8_27
Type: CAZyme
Location: 35284 - 36279 (-)
Type: CAZyme
Location: 35284 - 36279 (-)
Gene ID: HRGMv2_4245_8_28
Type: CAZyme
Location: 36452 - 38419 (+)
Type: CAZyme
Location: 36452 - 38419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hungatella_B
Species
Hungatella_B pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.