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Cluster: HRGMv2_4245_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4245_5 HRGMv2_4245_5_33 31936 32388 - 9.A.11.1.1
pfam HRGMv2_4245_5 HRGMv2_4245_5_34 32406 32831 - SpoVAB
TC HRGMv2_4245_5 HRGMv2_4245_5_35 32821 33447 - 9.A.11.1.1
pfam HRGMv2_4245_5 HRGMv2_4245_5_36 33765 34775 + SpoVAD
pfam HRGMv2_4245_5 HRGMv2_4245_5_37 34788 35144 + SpoVAC_SpoVAEB
CAZyme HRGMv2_4245_5 HRGMv2_4245_5_38 35234 37897 - GT51
pfam HRGMv2_4245_5 HRGMv2_4245_5_39 38109 38759 + UPF0029 | DUF1949
sulfatase HRGMv2_4245_5 HRGMv2_4245_5_40 38960 40867 + S1_97
TC HRGMv2_4245_5 HRGMv2_4245_5_41 40948 41583 + 2.A.115.2.14
TF HRGMv2_4245_5 HRGMv2_4245_5_42 41680 42708 - LacI
TC HRGMv2_4245_5 HRGMv2_4245_5_43 43027 45249 + 4.A.1.1.17
pfam HRGMv2_4245_5 HRGMv2_4245_5_44 45299 46198 + Exo_endo_phos
CAZyme HRGMv2_4245_5 HRGMv2_4245_5_45 46230 47732 + GH77
TC HRGMv2_4245_5 HRGMv2_4245_5_46 47849 48403 - 2.A.51.1.6
Gene ID: HRGMv2_4245_5_33
Type: TC
Location: 31936 - 32388 (-)
Gene ID: HRGMv2_4245_5_34
Type: pfam
Location: 32406 - 32831 (-)
Gene ID: HRGMv2_4245_5_35
Type: TC
Location: 32821 - 33447 (-)
Gene ID: HRGMv2_4245_5_36
Type: pfam
Location: 33765 - 34775 (+)
Gene ID: HRGMv2_4245_5_37
Type: pfam
Location: 34788 - 35144 (+)
Gene ID: HRGMv2_4245_5_38
Type: CAZyme
Location: 35234 - 37897 (-)
Gene ID: HRGMv2_4245_5_39
Type: pfam
Location: 38109 - 38759 (+)
Gene ID: HRGMv2_4245_5_40
Type: sulfatase
Location: 38960 - 40867 (+)
Gene ID: HRGMv2_4245_5_41
Type: TC
Location: 40948 - 41583 (+)
Gene ID: HRGMv2_4245_5_42
Type: TF
Location: 41680 - 42708 (-)
Gene ID: HRGMv2_4245_5_43
Type: TC
Location: 43027 - 45249 (+)
Gene ID: HRGMv2_4245_5_44
Type: pfam
Location: 45299 - 46198 (+)
Gene ID: HRGMv2_4245_5_45
Type: CAZyme
Location: 46230 - 47732 (+)
Gene ID: HRGMv2_4245_5_46
Type: TC
Location: 47849 - 48403 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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