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Cluster: HRGMv2_4245_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4245_4 HRGMv2_4245_4_58 59959 61404 - GT5
STP HRGMv2_4245_4 HRGMv2_4245_4_59 61504 62304 - Response_reg | Spo0A_C
CAZyme HRGMv2_4245_4 HRGMv2_4245_4_60 62737 69036 - CE8 | PL1
TC HRGMv2_4245_4 HRGMv2_4245_4_61 69262 69930 - 3.A.1.5.18
TC HRGMv2_4245_4 HRGMv2_4245_4_62 69923 70867 - 3.A.1.5.29
TC HRGMv2_4245_4 HRGMv2_4245_4_63 70867 71694 - 3.A.1.5.20
TC HRGMv2_4245_4 HRGMv2_4245_4_64 71691 72632 - 3.A.1.5.3
TC HRGMv2_4245_4 HRGMv2_4245_4_65 72645 74276 - 3.A.1.5.39
Gene ID: HRGMv2_4245_4_58
Type: CAZyme
Location: 59959 - 61404 (-)
Gene ID: HRGMv2_4245_4_59
Type: STP
Location: 61504 - 62304 (-)
Gene ID: HRGMv2_4245_4_60
Type: CAZyme
Location: 62737 - 69036 (-)
Gene ID: HRGMv2_4245_4_61
Type: TC
Location: 69262 - 69930 (-)
Gene ID: HRGMv2_4245_4_62
Type: TC
Location: 69923 - 70867 (-)
Gene ID: HRGMv2_4245_4_63
Type: TC
Location: 70867 - 71694 (-)
Gene ID: HRGMv2_4245_4_64
Type: TC
Location: 71691 - 72632 (-)
Gene ID: HRGMv2_4245_4_65
Type: TC
Location: 72645 - 74276 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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