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Cluster: HRGMv2_4243_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4243_2 HRGMv2_4243_2_181 191551 193533 - GH151
TC HRGMv2_4243_2 HRGMv2_4243_2_182 193572 194393 - 3.A.1.1.45
TC HRGMv2_4243_2 HRGMv2_4243_2_183 194393 195268 - 3.A.1.1.34
STP HRGMv2_4243_2 HRGMv2_4243_2_184 195386 196702 - SBP_bac_1
TC HRGMv2_4243_2 HRGMv2_4243_2_185 196882 198711 + 8.A.59.2.1
Gene ID: HRGMv2_4243_2_181
Type: CAZyme
Location: 191551 - 193533 (-)
Gene ID: HRGMv2_4243_2_182
Type: TC
Location: 193572 - 194393 (-)
Gene ID: HRGMv2_4243_2_183
Type: TC
Location: 194393 - 195268 (-)
Gene ID: HRGMv2_4243_2_184
Type: STP
Location: 195386 - 196702 (-)
Gene ID: HRGMv2_4243_2_185
Type: TC
Location: 196882 - 198711 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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