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Cluster: HRGMv2_4243_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4243_19 HRGMv2_4243_19_1 159 1823 - 3.A.1.1.9
TC HRGMv2_4243_19 HRGMv2_4243_19_2 1820 3514 - 9.B.33.1.1
TF HRGMv2_4243_19 HRGMv2_4243_19_3 3489 5027 - HTH_AraC | HTH_AraC
TC HRGMv2_4243_19 HRGMv2_4243_19_4 5194 6036 - 3.A.1.1.45
TC HRGMv2_4243_19 HRGMv2_4243_19_5 6036 6890 - 3.A.1.1.45
TC HRGMv2_4243_19 HRGMv2_4243_19_6 7001 8278 - 3.A.1.1.45
TC HRGMv2_4243_19 HRGMv2_4243_19_7 8590 9990 + 2.A.25.1.5
pfam HRGMv2_4243_19 HRGMv2_4243_19_8 10079 10942 - F_bP_aldolase
CAZyme HRGMv2_4243_19 HRGMv2_4243_19_9 11374 13476 - CBM34 | GH13_39
TC HRGMv2_4243_19 HRGMv2_4243_19_10 13811 15661 - 3.A.16.1.1
Gene ID: HRGMv2_4243_19_1
Type: TC
Location: 159 - 1823 (-)
Gene ID: HRGMv2_4243_19_2
Type: TC
Location: 1820 - 3514 (-)
Gene ID: HRGMv2_4243_19_3
Type: TF
Location: 3489 - 5027 (-)
Gene ID: HRGMv2_4243_19_4
Type: TC
Location: 5194 - 6036 (-)
Gene ID: HRGMv2_4243_19_5
Type: TC
Location: 6036 - 6890 (-)
Gene ID: HRGMv2_4243_19_6
Type: TC
Location: 7001 - 8278 (-)
Gene ID: HRGMv2_4243_19_7
Type: TC
Location: 8590 - 9990 (+)
Gene ID: HRGMv2_4243_19_8
Type: pfam
Location: 10079 - 10942 (-)
Gene ID: HRGMv2_4243_19_9
Type: CAZyme
Location: 11374 - 13476 (-)
Gene ID: HRGMv2_4243_19_10
Type: TC
Location: 13811 - 15661 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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