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Cluster: HRGMv2_4243_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4243_15 HRGMv2_4243_15_20 24109 25632 + GH43_4
NULL(UNKNOWN) HRGMv2_4243_15 HRGMv2_4243_15_21 25674 25919 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4243_15 HRGMv2_4243_15_22 25867 28188 + SBP_bac_1
TC HRGMv2_4243_15 HRGMv2_4243_15_23 28185 29111 + 3.A.1.1.34
TC HRGMv2_4243_15 HRGMv2_4243_15_24 29128 30000 + 3.A.1.1.39
pfam HRGMv2_4243_15 HRGMv2_4243_15_25 30015 32054 + Yip1
pfam HRGMv2_4243_15 HRGMv2_4243_15_26 32044 34350 + DUF5696
TC HRGMv2_4243_15 HRGMv2_4243_15_27 34353 35375 + 3.A.1.1.11
TC HRGMv2_4243_15 HRGMv2_4243_15_28 35326 36312 + 3.A.1.1.39
Gene ID: HRGMv2_4243_15_20
Type: CAZyme
Location: 24109 - 25632 (+)
Gene ID: HRGMv2_4243_15_21
Type:
Location: 25674 - 25919 (+)
Gene ID: HRGMv2_4243_15_22
Type: STP
Location: 25867 - 28188 (+)
Gene ID: HRGMv2_4243_15_23
Type: TC
Location: 28185 - 29111 (+)
Gene ID: HRGMv2_4243_15_24
Type: TC
Location: 29128 - 30000 (+)
Gene ID: HRGMv2_4243_15_25
Type: pfam
Location: 30015 - 32054 (+)
Gene ID: HRGMv2_4243_15_26
Type: pfam
Location: 32044 - 34350 (+)
Gene ID: HRGMv2_4243_15_27
Type: TC
Location: 34353 - 35375 (+)
Gene ID: HRGMv2_4243_15_28
Type: TC
Location: 35326 - 36312 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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