dbCAN HGM

Cluster: HRGMv2_4243_CGC3

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_4243_1	HRGMv2_4243_1_244	271926	272675	-	9.B.28.1.2
CAZyme	HRGMv2_4243_1	HRGMv2_4243_1_245	272824	273540	-	CE4
NULL(UNKNOWN)	HRGMv2_4243_1	HRGMv2_4243_1_246	273862	274815	+	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_4243_1	HRGMv2_4243_1_247	274991	276025	+	Peripla_BP_4
TC	HRGMv2_4243_1	HRGMv2_4243_1_248	276003	277487	+	8.A.59.2.1
TF	HRGMv2_4243_1	HRGMv2_4243_1_249	277491	279092	+	HTH_AraC \| HTH_AraC
TC	HRGMv2_4243_1	HRGMv2_4243_1_250	279095	280234	+	3.A.1.2.26
TC	HRGMv2_4243_1	HRGMv2_4243_1_251	280398	281468	+	3.A.1.2.5
TC	HRGMv2_4243_1	HRGMv2_4243_1_252	281570	283111	+	3.A.1.2.5
TC	HRGMv2_4243_1	HRGMv2_4243_1_253	283111	284295	+	3.A.1.2.5

Gene ID: HRGMv2_4243_1_244
Type: TC
Location: 271926 - 272675 (-)

Gene ID: HRGMv2_4243_1_245
Type: CAZyme
Location: 272824 - 273540 (-)

Gene ID: HRGMv2_4243_1_246
Type:
Location: 273862 - 274815 (+)

Gene ID: HRGMv2_4243_1_247
Type: pfam
Location: 274991 - 276025 (+)

Gene ID: HRGMv2_4243_1_248
Type: TC
Location: 276003 - 277487 (+)

Gene ID: HRGMv2_4243_1_249
Type: TF
Location: 277491 - 279092 (+)

Gene ID: HRGMv2_4243_1_250
Type: TC
Location: 279095 - 280234 (+)

Gene ID: HRGMv2_4243_1_251
Type: TC
Location: 280398 - 281468 (+)

Gene ID: HRGMv2_4243_1_252
Type: TC
Location: 281570 - 283111 (+)

Gene ID: HRGMv2_4243_1_253
Type: TC
Location: 283111 - 284295 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_4243_1_251	vegetarian > omnivore	1.26275	0.03101
HRGMv2_4243_1_252	vegetarian > vegan	1.01970	0.01303
HRGMv2_4243_1_253	vegetarian > vegan	1.68508	0.04423