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Cluster: HRGMv2_4243_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4243_8 HRGMv2_4243_8_59 69213 70691 - 3.A.1.2.3
TF HRGMv2_4243_8 HRGMv2_4243_8_60 70716 71489 - HTH_DeoR
TC HRGMv2_4243_8 HRGMv2_4243_8_61 71767 73275 + 3.A.1.2.20
TC HRGMv2_4243_8 HRGMv2_4243_8_62 73282 74277 + 3.A.1.2.16
TC HRGMv2_4243_8 HRGMv2_4243_8_63 74390 75391 + 3.A.1.2.20
CAZyme HRGMv2_4243_8 HRGMv2_4243_8_64 75474 77489 + GH127
CAZyme HRGMv2_4243_8 HRGMv2_4243_8_65 77529 79541 + GH31_4
Gene ID: HRGMv2_4243_8_59
Type: TC
Location: 69213 - 70691 (-)
Gene ID: HRGMv2_4243_8_60
Type: TF
Location: 70716 - 71489 (-)
Gene ID: HRGMv2_4243_8_61
Type: TC
Location: 71767 - 73275 (+)
Gene ID: HRGMv2_4243_8_62
Type: TC
Location: 73282 - 74277 (+)
Gene ID: HRGMv2_4243_8_63
Type: TC
Location: 74390 - 75391 (+)
Gene ID: HRGMv2_4243_8_64
Type: CAZyme
Location: 75474 - 77489 (+)
Gene ID: HRGMv2_4243_8_65
Type: CAZyme
Location: 77529 - 79541 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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