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Cluster: HRGMv2_4243_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4243_8 HRGMv2_4243_8_43 49632 50366 + 3.A.1.103.5
pfam HRGMv2_4243_8 HRGMv2_4243_8_44 50584 52797 + Glyphos_transf
pfam HRGMv2_4243_8 HRGMv2_4243_8_45 52817 54379 + Glyphos_transf
TC HRGMv2_4243_8 HRGMv2_4243_8_46 54393 55496 + 9.B.97.6.1
pfam HRGMv2_4243_8 HRGMv2_4243_8_47 55498 56661 + Glyphos_transf
CAZyme HRGMv2_4243_8 HRGMv2_4243_8_48 56645 59041 + GT4
Gene ID: HRGMv2_4243_8_43
Type: TC
Location: 49632 - 50366 (+)
Gene ID: HRGMv2_4243_8_44
Type: pfam
Location: 50584 - 52797 (+)
Gene ID: HRGMv2_4243_8_45
Type: pfam
Location: 52817 - 54379 (+)
Gene ID: HRGMv2_4243_8_46
Type: TC
Location: 54393 - 55496 (+)
Gene ID: HRGMv2_4243_8_47
Type: pfam
Location: 55498 - 56661 (+)
Gene ID: HRGMv2_4243_8_48
Type: CAZyme
Location: 56645 - 59041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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