dbCAN Logo

Cluster: HRGMv2_4243_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4243_1 HRGMv2_4243_1_191 208747 209229 + 4.A.1.2.2
TC HRGMv2_4243_1 HRGMv2_4243_1_192 209404 210870 + 4.A.1.1.7
TF HRGMv2_4243_1 HRGMv2_4243_1_193 210967 211983 - LacI
STP HRGMv2_4243_1 HRGMv2_4243_1_194 212265 213506 + SBP_bac_1
TC HRGMv2_4243_1 HRGMv2_4243_1_195 213522 214898 + 3.A.1.1.27
TC HRGMv2_4243_1 HRGMv2_4243_1_196 214895 215773 + 3.A.1.1.27
CAZyme HRGMv2_4243_1 HRGMv2_4243_1_197 215878 217821 + GH13_14
CAZyme HRGMv2_4243_1 HRGMv2_4243_1_198 217843 219387 + GH77
CAZyme HRGMv2_4243_1 HRGMv2_4243_1_199 219406 221391 + GH133
CAZyme HRGMv2_4243_1 HRGMv2_4243_1_200 221391 223439 + GH31_1
TF HRGMv2_4243_1 HRGMv2_4243_1_201 223492 224388 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4243_1 HRGMv2_4243_1_202 224527 226788 + GT35
Gene ID: HRGMv2_4243_1_191
Type: TC
Location: 208747 - 209229 (+)
Gene ID: HRGMv2_4243_1_192
Type: TC
Location: 209404 - 210870 (+)
Gene ID: HRGMv2_4243_1_193
Type: TF
Location: 210967 - 211983 (-)
Gene ID: HRGMv2_4243_1_194
Type: STP
Location: 212265 - 213506 (+)
Gene ID: HRGMv2_4243_1_195
Type: TC
Location: 213522 - 214898 (+)
Gene ID: HRGMv2_4243_1_196
Type: TC
Location: 214895 - 215773 (+)
Gene ID: HRGMv2_4243_1_197
Type: CAZyme
Location: 215878 - 217821 (+)
Gene ID: HRGMv2_4243_1_198
Type: CAZyme
Location: 217843 - 219387 (+)
Gene ID: HRGMv2_4243_1_199
Type: CAZyme
Location: 219406 - 221391 (+)
Gene ID: HRGMv2_4243_1_200
Type: CAZyme
Location: 221391 - 223439 (+)
Gene ID: HRGMv2_4243_1_201
Type: TF
Location: 223492 - 224388 (-)
Gene ID: HRGMv2_4243_1_202
Type: CAZyme
Location: 224527 - 226788 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List