Cluster: HRGMv2_4243_CGC18
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate: beta-mannan
- Genome ID: HRGMv2_4243
- CGC Family ID: CGCFAM_00226
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_128 | 129089 | 130450 | - | GH1 |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_129 | 130519 | 132840 | - | CBM23 | GH26 |
| pfam | HRGMv2_4243_4 | HRGMv2_4243_4_130 | 132899 | 134224 | - | PMI_typeI_cat | MPI_cupin_dom |
| pfam | HRGMv2_4243_4 | HRGMv2_4243_4_131 | 134221 | 135957 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_132 | 135972 | 137087 | - | CBM35inCE17 | CE17 |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_133 | 137092 | 138138 | - | CE2 |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_134 | 138154 | 139326 | - | GH130_1 |
| pfam | HRGMv2_4243_4 | HRGMv2_4243_4_135 | 139323 | 140486 | - | GlcNAc_2-epim | Beta-AFase-like_GH127_cat |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_136 | 140621 | 141646 | - | GH130_2 |
| TC | HRGMv2_4243_4 | HRGMv2_4243_4_137 | 141674 | 142522 | - | 3.A.1.1.34 |
| TC | HRGMv2_4243_4 | HRGMv2_4243_4_138 | 142522 | 143526 | - | 3.A.1.1.9 |
| STP | HRGMv2_4243_4 | HRGMv2_4243_4_139 | 143610 | 144965 | - | SBP_bac_1 |
| TF | HRGMv2_4243_4 | HRGMv2_4243_4_140 | 145275 | 146276 | - | LacI |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_141 | 146301 | 148499 | - | GH36 |
| CAZyme | HRGMv2_4243_4 | HRGMv2_4243_4_142 | 148603 | 149541 | - | GH113 |
Gene ID: HRGMv2_4243_4_128
Type: CAZyme
Location: 129089 - 130450 (-)
Type: CAZyme
Location: 129089 - 130450 (-)
Gene ID: HRGMv2_4243_4_129
Type: CAZyme
Location: 130519 - 132840 (-)
Type: CAZyme
Location: 130519 - 132840 (-)
Gene ID: HRGMv2_4243_4_130
Type: pfam
Location: 132899 - 134224 (-)
Type: pfam
Location: 132899 - 134224 (-)
Gene ID: HRGMv2_4243_4_131
Type: pfam
Location: 134221 - 135957 (-)
Type: pfam
Location: 134221 - 135957 (-)
Gene ID: HRGMv2_4243_4_132
Type: CAZyme
Location: 135972 - 137087 (-)
Type: CAZyme
Location: 135972 - 137087 (-)
Gene ID: HRGMv2_4243_4_133
Type: CAZyme
Location: 137092 - 138138 (-)
Type: CAZyme
Location: 137092 - 138138 (-)
Gene ID: HRGMv2_4243_4_134
Type: CAZyme
Location: 138154 - 139326 (-)
Type: CAZyme
Location: 138154 - 139326 (-)
Gene ID: HRGMv2_4243_4_135
Type: pfam
Location: 139323 - 140486 (-)
Type: pfam
Location: 139323 - 140486 (-)
Gene ID: HRGMv2_4243_4_136
Type: CAZyme
Location: 140621 - 141646 (-)
Type: CAZyme
Location: 140621 - 141646 (-)
Gene ID: HRGMv2_4243_4_137
Type: TC
Location: 141674 - 142522 (-)
Type: TC
Location: 141674 - 142522 (-)
Gene ID: HRGMv2_4243_4_138
Type: TC
Location: 142522 - 143526 (-)
Type: TC
Location: 142522 - 143526 (-)
Gene ID: HRGMv2_4243_4_139
Type: STP
Location: 143610 - 144965 (-)
Type: STP
Location: 143610 - 144965 (-)
Gene ID: HRGMv2_4243_4_140
Type: TF
Location: 145275 - 146276 (-)
Type: TF
Location: 145275 - 146276 (-)
Gene ID: HRGMv2_4243_4_141
Type: CAZyme
Location: 146301 - 148499 (-)
Type: CAZyme
Location: 146301 - 148499 (-)
Gene ID: HRGMv2_4243_4_142
Type: CAZyme
Location: 148603 - 149541 (-)
Type: CAZyme
Location: 148603 - 149541 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp958367245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.