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Cluster: HRGMv2_4242_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4242_6 HRGMv2_4242_6_13 12051 14495 - GH2
CAZyme HRGMv2_4242_6 HRGMv2_4242_6_14 14473 16965 - GH2
TC HRGMv2_4242_6 HRGMv2_4242_6_15 16992 17933 - 8.A.5.1.6
CAZyme HRGMv2_4242_6 HRGMv2_4242_6_16 17946 20378 - GH2
TC HRGMv2_4242_6 HRGMv2_4242_6_17 20383 21207 - 3.A.1.1.48
TC HRGMv2_4242_6 HRGMv2_4242_6_18 21204 22103 - 3.A.1.1.23
STP HRGMv2_4242_6 HRGMv2_4242_6_19 22188 23507 - SBP_bac_1
TC HRGMv2_4242_6 HRGMv2_4242_6_20 23681 25378 - 8.A.59.2.1
Gene ID: HRGMv2_4242_6_13
Type: CAZyme
Location: 12051 - 14495 (-)
Gene ID: HRGMv2_4242_6_14
Type: CAZyme
Location: 14473 - 16965 (-)
Gene ID: HRGMv2_4242_6_15
Type: TC
Location: 16992 - 17933 (-)
Gene ID: HRGMv2_4242_6_16
Type: CAZyme
Location: 17946 - 20378 (-)
Gene ID: HRGMv2_4242_6_17
Type: TC
Location: 20383 - 21207 (-)
Gene ID: HRGMv2_4242_6_18
Type: TC
Location: 21204 - 22103 (-)
Gene ID: HRGMv2_4242_6_19
Type: STP
Location: 22188 - 23507 (-)
Gene ID: HRGMv2_4242_6_20
Type: TC
Location: 23681 - 25378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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