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Cluster: HRGMv2_4242_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4242_51 HRGMv2_4242_51_6 3905 5701 + 3.A.1.106.8
TC HRGMv2_4242_51 HRGMv2_4242_51_7 5704 7581 + 3.A.1.106.3
TC HRGMv2_4242_51 HRGMv2_4242_51_8 7574 8131 + 4.F.1.1.8
pfam HRGMv2_4242_51 HRGMv2_4242_51_9 8125 8742 + G3P_acyltransf
CAZyme HRGMv2_4242_51 HRGMv2_4242_51_10 8746 9858 + GT28
CAZyme HRGMv2_4242_51 HRGMv2_4242_51_11 9896 11563 + GH13_31
TC HRGMv2_4242_51 HRGMv2_4242_51_12 11635 12600 - 2.A.19.5.2
TC HRGMv2_4242_51 HRGMv2_4242_51_13 12761 14578 + 3.A.1.120.6
Gene ID: HRGMv2_4242_51_6
Type: TC
Location: 3905 - 5701 (+)
Gene ID: HRGMv2_4242_51_7
Type: TC
Location: 5704 - 7581 (+)
Gene ID: HRGMv2_4242_51_8
Type: TC
Location: 7574 - 8131 (+)
Gene ID: HRGMv2_4242_51_9
Type: pfam
Location: 8125 - 8742 (+)
Gene ID: HRGMv2_4242_51_10
Type: CAZyme
Location: 8746 - 9858 (+)
Gene ID: HRGMv2_4242_51_11
Type: CAZyme
Location: 9896 - 11563 (+)
Gene ID: HRGMv2_4242_51_12
Type: TC
Location: 11635 - 12600 (-)
Gene ID: HRGMv2_4242_51_13
Type: TC
Location: 12761 - 14578 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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